Gene : AT1G19025 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23240//PTHR23240:SF11 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1914
Name:  ? AT1G19025 Secondary Identifier:  ? PAC:19651662
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G19025 0.5kb upstream 0.5kb upstream 2587 true Chr1: 6568353-6570939 Arabidopsis thaliana
AT1G19025 0.5kb upstream 0.5kb upstream 500 false Chr1: 6568353-6568852 Arabidopsis thaliana
AT1G19025 0.5kb downstream 0.5kb downstream 2587 true Chr1: 6568853-6571439 Arabidopsis thaliana
AT1G19025 0.5kb downstream 0.5kb downstream 500 false Chr1: 6570940-6571439 Arabidopsis thaliana
AT1G19025 1.0kb upstream 1.0kb upstream 3087 true Chr1: 6567853-6570939 Arabidopsis thaliana
AT1G19025 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6567853-6568852 Arabidopsis thaliana
AT1G19025 1.0kb downstream 1.0kb downstream 3087 true Chr1: 6568853-6571939 Arabidopsis thaliana
AT1G19025 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6570940-6571939 Arabidopsis thaliana
AT1G19025 2.0kb upstream 2.0kb upstream 4087 true Chr1: 6566853-6570939 Arabidopsis thaliana
AT1G19025 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6566853-6568852 Arabidopsis thaliana
AT1G19025 2.0kb downstream 2.0kb downstream 4087 true Chr1: 6568853-6572939 Arabidopsis thaliana
AT1G19025 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6570940-6572939 Arabidopsis thaliana
AT1G19025 5.0kb upstream 5.0kb upstream 7087 true Chr1: 6563853-6570939 Arabidopsis thaliana
AT1G19025 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6563853-6568852 Arabidopsis thaliana
AT1G19025 5.0kb downstream 5.0kb downstream 7087 true Chr1: 6568853-6575939 Arabidopsis thaliana
AT1G19025 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6570940-6575939 Arabidopsis thaliana
AT1G19025 10.0kb upstream 10.0kb upstream 12087 true Chr1: 6558853-6570939 Arabidopsis thaliana
AT1G19025 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6558853-6568852 Arabidopsis thaliana
AT1G19025 10.0kb downstream 10.0kb downstream 12087 true Chr1: 6568853-6580939 Arabidopsis thaliana
AT1G19025 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6570940-6580939 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365926 5261 Brassicaceae View MSA
123833863 5264 Brassicales-Malvales View MSA
124336941 5266 SBM View MSA
124239407 5268 Malvidae View MSA
124068668 5270 Rosid View MSA
123740105 5271 Pentapetalae View MSA
122792386 5272 Eudicot View MSA
122043083 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.955        
cufflinks 3.483        
cufflinks 1.804        
cufflinks 4.068       High
cufflinks 1.421       Low
cufflinks 3.572        

0 Strain