Gene : AT1G18960 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10641//PTHR10641:SF631 - MYB-LIKE DNA-BINDING PROTEIN MYB // F14D16.11-RELATED Genomic Order:  1907
Name:  ? AT1G18960 Secondary Identifier:  ? PAC:19656509
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18960 0.5kb upstream 0.5kb upstream 1689 true Chr1: 6552252-6553940 Arabidopsis thaliana
AT1G18960 0.5kb upstream 0.5kb upstream 500 false Chr1: 6552252-6552751 Arabidopsis thaliana
AT1G18960 0.5kb downstream 0.5kb downstream 1689 true Chr1: 6552752-6554440 Arabidopsis thaliana
AT1G18960 0.5kb downstream 0.5kb downstream 500 false Chr1: 6553941-6554440 Arabidopsis thaliana
AT1G18960 1.0kb upstream 1.0kb upstream 2189 true Chr1: 6551752-6553940 Arabidopsis thaliana
AT1G18960 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6551752-6552751 Arabidopsis thaliana
AT1G18960 1.0kb downstream 1.0kb downstream 2189 true Chr1: 6552752-6554940 Arabidopsis thaliana
AT1G18960 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6553941-6554940 Arabidopsis thaliana
AT1G18960 2.0kb upstream 2.0kb upstream 3189 true Chr1: 6550752-6553940 Arabidopsis thaliana
AT1G18960 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6550752-6552751 Arabidopsis thaliana
AT1G18960 2.0kb downstream 2.0kb downstream 3189 true Chr1: 6552752-6555940 Arabidopsis thaliana
AT1G18960 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6553941-6555940 Arabidopsis thaliana
AT1G18960 5.0kb upstream 5.0kb upstream 6189 true Chr1: 6547752-6553940 Arabidopsis thaliana
AT1G18960 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6547752-6552751 Arabidopsis thaliana
AT1G18960 5.0kb downstream 5.0kb downstream 6189 true Chr1: 6552752-6558940 Arabidopsis thaliana
AT1G18960 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6553941-6558940 Arabidopsis thaliana
AT1G18960 10.0kb upstream 10.0kb upstream 11189 true Chr1: 6542752-6553940 Arabidopsis thaliana
AT1G18960 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6542752-6552751 Arabidopsis thaliana
AT1G18960 10.0kb downstream 10.0kb downstream 11189 true Chr1: 6552752-6563940 Arabidopsis thaliana
AT1G18960 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6553941-6563940 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367225 5261 Brassicaceae View MSA
123799312 5264 Brassicales-Malvales View MSA
124296845 5266 SBM View MSA
124148887 5268 Malvidae View MSA
123874799 5270 Rosid View MSA
123742365 5271 Pentapetalae View MSA
122786353 5272 Eudicot View MSA
122041788 5273 Angiosperm View MSA
121350452 5274 Embryophyte View MSA
123381739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.261     Low  
cufflinks 0.295     Low  
cufflinks 0.112     Low Low
cufflinks 0.345     Low  
cufflinks 0.154     Low  
cufflinks 0.295     Low  

0 Strain