Gene : AT1G18440 A. thaliana TAIR10
Defline:  (1 of 1) PTHR17224//PTHR17224:SF5 - PEPTIDYL-TRNA HYDROLASE // SUBFAMILY NOT NAMED Genomic Order:  1853
Name:  ? AT1G18440 Secondary Identifier:  ? PAC:19651557
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18440 0.5kb upstream 0.5kb upstream 2437 true Chr1: 6345474-6347910 Arabidopsis thaliana
AT1G18440 0.5kb upstream 0.5kb upstream 500 false Chr1: 6345474-6345973 Arabidopsis thaliana
AT1G18440 0.5kb downstream 0.5kb downstream 2437 true Chr1: 6345974-6348410 Arabidopsis thaliana
AT1G18440 0.5kb downstream 0.5kb downstream 500 false Chr1: 6347911-6348410 Arabidopsis thaliana
AT1G18440 1.0kb upstream 1.0kb upstream 2937 true Chr1: 6344974-6347910 Arabidopsis thaliana
AT1G18440 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6344974-6345973 Arabidopsis thaliana
AT1G18440 1.0kb downstream 1.0kb downstream 2937 true Chr1: 6345974-6348910 Arabidopsis thaliana
AT1G18440 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6347911-6348910 Arabidopsis thaliana
AT1G18440 2.0kb upstream 2.0kb upstream 3937 true Chr1: 6343974-6347910 Arabidopsis thaliana
AT1G18440 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6343974-6345973 Arabidopsis thaliana
AT1G18440 2.0kb downstream 2.0kb downstream 3937 true Chr1: 6345974-6349910 Arabidopsis thaliana
AT1G18440 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6347911-6349910 Arabidopsis thaliana
AT1G18440 5.0kb upstream 5.0kb upstream 6937 true Chr1: 6340974-6347910 Arabidopsis thaliana
AT1G18440 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6340974-6345973 Arabidopsis thaliana
AT1G18440 5.0kb downstream 5.0kb downstream 6937 true Chr1: 6345974-6352910 Arabidopsis thaliana
AT1G18440 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6347911-6352910 Arabidopsis thaliana
AT1G18440 10.0kb upstream 10.0kb upstream 11937 true Chr1: 6335974-6347910 Arabidopsis thaliana
AT1G18440 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6335974-6345973 Arabidopsis thaliana
AT1G18440 10.0kb downstream 10.0kb downstream 11937 true Chr1: 6345974-6357910 Arabidopsis thaliana
AT1G18440 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6347911-6357910 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370109 5261 Brassicaceae View MSA
123836322 5264 Brassicales-Malvales View MSA
124345715 5266 SBM View MSA
124238474 5268 Malvidae View MSA
124063033 5270 Rosid View MSA
123738074 5271 Pentapetalae View MSA
122785873 5272 Eudicot View MSA
122049044 5273 Angiosperm View MSA
121347021 5274 Embryophyte View MSA
123426354 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.459        
cufflinks 6.975        
cufflinks 10.048       High
cufflinks 6.458        
cufflinks 9.062        
cufflinks 6.373       Low

0 Strain