Gene : AT1G18420 A. thaliana TAIR10
Defline:  (1 of 5) PTHR31086:SF20 - ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED Genomic Order:  1852
Name:  ? AT1G18420 Secondary Identifier:  ? PAC:19654619
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18420 0.5kb upstream 0.5kb upstream 2860 true Chr1: 6342830-6345689 Arabidopsis thaliana
AT1G18420 0.5kb upstream 0.5kb upstream 500 false Chr1: 6342830-6343329 Arabidopsis thaliana
AT1G18420 0.5kb downstream 0.5kb downstream 2860 true Chr1: 6343330-6346189 Arabidopsis thaliana
AT1G18420 0.5kb downstream 0.5kb downstream 500 false Chr1: 6345690-6346189 Arabidopsis thaliana
AT1G18420 1.0kb upstream 1.0kb upstream 3360 true Chr1: 6342330-6345689 Arabidopsis thaliana
AT1G18420 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6342330-6343329 Arabidopsis thaliana
AT1G18420 1.0kb downstream 1.0kb downstream 3360 true Chr1: 6343330-6346689 Arabidopsis thaliana
AT1G18420 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6345690-6346689 Arabidopsis thaliana
AT1G18420 2.0kb upstream 2.0kb upstream 4360 true Chr1: 6341330-6345689 Arabidopsis thaliana
AT1G18420 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6341330-6343329 Arabidopsis thaliana
AT1G18420 2.0kb downstream 2.0kb downstream 4360 true Chr1: 6343330-6347689 Arabidopsis thaliana
AT1G18420 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6345690-6347689 Arabidopsis thaliana
AT1G18420 5.0kb upstream 5.0kb upstream 7360 true Chr1: 6338330-6345689 Arabidopsis thaliana
AT1G18420 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6338330-6343329 Arabidopsis thaliana
AT1G18420 5.0kb downstream 5.0kb downstream 7360 true Chr1: 6343330-6350689 Arabidopsis thaliana
AT1G18420 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6345690-6350689 Arabidopsis thaliana
AT1G18420 10.0kb upstream 10.0kb upstream 12360 true Chr1: 6333330-6345689 Arabidopsis thaliana
AT1G18420 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6333330-6343329 Arabidopsis thaliana
AT1G18420 10.0kb downstream 10.0kb downstream 12360 true Chr1: 6343330-6355689 Arabidopsis thaliana
AT1G18420 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6345690-6355689 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361448 5261 Brassicaceae View MSA
123798175 5264 Brassicales-Malvales View MSA
124295847 5266 SBM View MSA
124148172 5268 Malvidae View MSA
123874222 5270 Rosid View MSA
123751150 5271 Pentapetalae View MSA
122792195 5272 Eudicot View MSA
122047214 5273 Angiosperm View MSA
121351604 5274 Embryophyte View MSA
123428514 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.035     Low Low
cufflinks 0.122     Low  
cufflinks 0.047     Low  
cufflinks 0.307     Low  
cufflinks 0.156     Low  
cufflinks 0.627       High

0 Strain