Gene : AT1G18170 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10516:SF308 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATED Genomic Order:  1828
Name:  ? AT1G18170 Secondary Identifier:  ? PAC:19650664
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18170 0.5kb upstream 0.5kb upstream 1962 true Chr1: 6253729-6255690 Arabidopsis thaliana
AT1G18170 0.5kb upstream 0.5kb upstream 500 false Chr1: 6253729-6254228 Arabidopsis thaliana
AT1G18170 0.5kb downstream 0.5kb downstream 1962 true Chr1: 6254229-6256190 Arabidopsis thaliana
AT1G18170 0.5kb downstream 0.5kb downstream 500 false Chr1: 6255691-6256190 Arabidopsis thaliana
AT1G18170 1.0kb upstream 1.0kb upstream 2462 true Chr1: 6253229-6255690 Arabidopsis thaliana
AT1G18170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6253229-6254228 Arabidopsis thaliana
AT1G18170 1.0kb downstream 1.0kb downstream 2462 true Chr1: 6254229-6256690 Arabidopsis thaliana
AT1G18170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6255691-6256690 Arabidopsis thaliana
AT1G18170 2.0kb upstream 2.0kb upstream 3462 true Chr1: 6252229-6255690 Arabidopsis thaliana
AT1G18170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6252229-6254228 Arabidopsis thaliana
AT1G18170 2.0kb downstream 2.0kb downstream 3462 true Chr1: 6254229-6257690 Arabidopsis thaliana
AT1G18170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6255691-6257690 Arabidopsis thaliana
AT1G18170 5.0kb upstream 5.0kb upstream 6462 true Chr1: 6249229-6255690 Arabidopsis thaliana
AT1G18170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6249229-6254228 Arabidopsis thaliana
AT1G18170 5.0kb downstream 5.0kb downstream 6462 true Chr1: 6254229-6260690 Arabidopsis thaliana
AT1G18170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6255691-6260690 Arabidopsis thaliana
AT1G18170 10.0kb upstream 10.0kb upstream 11462 true Chr1: 6244229-6255690 Arabidopsis thaliana
AT1G18170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6244229-6254228 Arabidopsis thaliana
AT1G18170 10.0kb downstream 10.0kb downstream 11462 true Chr1: 6254229-6265690 Arabidopsis thaliana
AT1G18170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6255691-6265690 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041293 5273 Angiosperm View MSA
122369851 5261 Brassicaceae View MSA
123834523 5264 Brassicales-Malvales View MSA
124342022 5266 SBM View MSA
124237774 5268 Malvidae View MSA
124068387 5270 Rosid View MSA
123740147 5271 Pentapetalae View MSA
122793412 5272 Eudicot View MSA
121344596 5274 Embryophyte View MSA
123424769 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.532        
cufflinks 0.375        
cufflinks 27.963     High  
cufflinks 0.59        
cufflinks 20.873        
cufflinks 0.421        

0 Strain