Gene : OCT2 A. thaliana TAIR10
Primary Identifier:  ? AT1G79360 Defline:  (1 of 2) PTHR24064//PTHR24064:SF242 - FAMILY NOT NAMED // ORGANIC CATION/CARNITINE TRANSPORTER 3
Genomic Order:  6913 Name:  ? AT1G79360
Secondary Identifier:  ? PAC:19657321
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79360 0.5kb upstream 0.5kb upstream 2284 true Chr1: 29854038-29856321 Arabidopsis thaliana
AT1G79360 0.5kb upstream 0.5kb upstream 500 false Chr1: 29855822-29856321 Arabidopsis thaliana
AT1G79360 0.5kb downstream 0.5kb downstream 2284 true Chr1: 29853538-29855821 Arabidopsis thaliana
AT1G79360 0.5kb downstream 0.5kb downstream 500 false Chr1: 29853538-29854037 Arabidopsis thaliana
AT1G79360 1.0kb upstream 1.0kb upstream 2784 true Chr1: 29854038-29856821 Arabidopsis thaliana
AT1G79360 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29855822-29856821 Arabidopsis thaliana
AT1G79360 1.0kb downstream 1.0kb downstream 2784 true Chr1: 29853038-29855821 Arabidopsis thaliana
AT1G79360 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29853038-29854037 Arabidopsis thaliana
AT1G79360 2.0kb upstream 2.0kb upstream 3784 true Chr1: 29854038-29857821 Arabidopsis thaliana
AT1G79360 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29855822-29857821 Arabidopsis thaliana
AT1G79360 2.0kb downstream 2.0kb downstream 3784 true Chr1: 29852038-29855821 Arabidopsis thaliana
AT1G79360 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29852038-29854037 Arabidopsis thaliana
AT1G79360 5.0kb upstream 5.0kb upstream 6784 true Chr1: 29854038-29860821 Arabidopsis thaliana
AT1G79360 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29855822-29860821 Arabidopsis thaliana
AT1G79360 5.0kb downstream 5.0kb downstream 6784 true Chr1: 29849038-29855821 Arabidopsis thaliana
AT1G79360 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29849038-29854037 Arabidopsis thaliana
AT1G79360 10.0kb upstream 10.0kb upstream 11784 true Chr1: 29854038-29865821 Arabidopsis thaliana
AT1G79360 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29855822-29865821 Arabidopsis thaliana
AT1G79360 10.0kb downstream 10.0kb downstream 11784 true Chr1: 29844038-29855821 Arabidopsis thaliana
AT1G79360 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29844038-29854037 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364183 5261 Brassicaceae View MSA
123798702 5264 Brassicales-Malvales View MSA
124296306 5266 SBM View MSA
124251274 5268 Malvidae View MSA
124063711 5270 Rosid View MSA
123752944 5271 Pentapetalae View MSA
122793409 5272 Eudicot View MSA
122049028 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121351070 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.515        
cufflinks 0.492        
cufflinks 0.578        
cufflinks 1.711       High
cufflinks 0.966        
cufflinks 1.259        

0 Strain