Gene : AT1G79420 A. thaliana TAIR10
Defline:  (1 of 9) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  6919
Name:  ? AT1G79420 Secondary Identifier:  ? PAC:19650736
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79420 0.5kb upstream 0.5kb upstream 3358 true Chr1: 29870958-29874315 Arabidopsis thaliana
AT1G79420 0.5kb upstream 0.5kb upstream 500 false Chr1: 29870958-29871457 Arabidopsis thaliana
AT1G79420 0.5kb downstream 0.5kb downstream 3358 true Chr1: 29871458-29874815 Arabidopsis thaliana
AT1G79420 0.5kb downstream 0.5kb downstream 500 false Chr1: 29874316-29874815 Arabidopsis thaliana
AT1G79420 1.0kb upstream 1.0kb upstream 3858 true Chr1: 29870458-29874315 Arabidopsis thaliana
AT1G79420 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29870458-29871457 Arabidopsis thaliana
AT1G79420 1.0kb downstream 1.0kb downstream 3858 true Chr1: 29871458-29875315 Arabidopsis thaliana
AT1G79420 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29874316-29875315 Arabidopsis thaliana
AT1G79420 2.0kb upstream 2.0kb upstream 4858 true Chr1: 29869458-29874315 Arabidopsis thaliana
AT1G79420 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29869458-29871457 Arabidopsis thaliana
AT1G79420 2.0kb downstream 2.0kb downstream 4858 true Chr1: 29871458-29876315 Arabidopsis thaliana
AT1G79420 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29874316-29876315 Arabidopsis thaliana
AT1G79420 5.0kb upstream 5.0kb upstream 7858 true Chr1: 29866458-29874315 Arabidopsis thaliana
AT1G79420 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29866458-29871457 Arabidopsis thaliana
AT1G79420 5.0kb downstream 5.0kb downstream 7858 true Chr1: 29871458-29879315 Arabidopsis thaliana
AT1G79420 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29874316-29879315 Arabidopsis thaliana
AT1G79420 10.0kb upstream 10.0kb upstream 12858 true Chr1: 29861458-29874315 Arabidopsis thaliana
AT1G79420 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29861458-29871457 Arabidopsis thaliana
AT1G79420 10.0kb downstream 10.0kb downstream 12858 true Chr1: 29871458-29884315 Arabidopsis thaliana
AT1G79420 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29874316-29884315 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363283 5261 Brassicaceae View MSA
123827344 5264 Brassicales-Malvales View MSA
124345467 5266 SBM View MSA
124242178 5268 Malvidae View MSA
124065577 5270 Rosid View MSA
123739517 5271 Pentapetalae View MSA
122769955 5272 Eudicot View MSA
122044240 5273 Angiosperm View MSA
121310259 5274 Embryophyte View MSA
123347798 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.756        
cufflinks 4.152        
cufflinks 0.475       Low
cufflinks 4.103        
cufflinks 0.535        
cufflinks 5.451       High

0 Strain