Gene : GGH2 A. thaliana TAIR10
Primary Identifier:  ? AT1G78680 Defline:  (1 of 3) 3.4.19.9 - Gamma-glutamyl hydrolase / Pteroyl-poly-alpha-glutamate hydrolase
Genomic Order:  6842 Name:  ? AT1G78680
Secondary Identifier:  ? PAC:19654507
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-2161B Arabidopsis thaliana pathologic  
Athaliana PWY-6842 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G78680 0.5kb upstream 0.5kb upstream 3015 true Chr1: 29593256-29596270 Arabidopsis thaliana
AT1G78680 0.5kb upstream 0.5kb upstream 500 false Chr1: 29593256-29593755 Arabidopsis thaliana
AT1G78680 0.5kb downstream 0.5kb downstream 3015 true Chr1: 29593756-29596770 Arabidopsis thaliana
AT1G78680 0.5kb downstream 0.5kb downstream 500 false Chr1: 29596271-29596770 Arabidopsis thaliana
AT1G78680 1.0kb upstream 1.0kb upstream 3515 true Chr1: 29592756-29596270 Arabidopsis thaliana
AT1G78680 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29592756-29593755 Arabidopsis thaliana
AT1G78680 1.0kb downstream 1.0kb downstream 3515 true Chr1: 29593756-29597270 Arabidopsis thaliana
AT1G78680 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29596271-29597270 Arabidopsis thaliana
AT1G78680 2.0kb upstream 2.0kb upstream 4515 true Chr1: 29591756-29596270 Arabidopsis thaliana
AT1G78680 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29591756-29593755 Arabidopsis thaliana
AT1G78680 2.0kb downstream 2.0kb downstream 4515 true Chr1: 29593756-29598270 Arabidopsis thaliana
AT1G78680 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29596271-29598270 Arabidopsis thaliana
AT1G78680 5.0kb upstream 5.0kb upstream 7515 true Chr1: 29588756-29596270 Arabidopsis thaliana
AT1G78680 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29588756-29593755 Arabidopsis thaliana
AT1G78680 5.0kb downstream 5.0kb downstream 7515 true Chr1: 29593756-29601270 Arabidopsis thaliana
AT1G78680 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29596271-29601270 Arabidopsis thaliana
AT1G78680 10.0kb upstream 10.0kb upstream 12515 true Chr1: 29583756-29596270 Arabidopsis thaliana
AT1G78680 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29583756-29593755 Arabidopsis thaliana
AT1G78680 10.0kb downstream 10.0kb downstream 12515 true Chr1: 29593756-29606270 Arabidopsis thaliana
AT1G78680 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29596271-29606270 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370552 5261 Brassicaceae View MSA
123837897 5264 Brassicales-Malvales View MSA
124347149 5266 SBM View MSA
124244715 5268 Malvidae View MSA
124064473 5270 Rosid View MSA
123739690 5271 Pentapetalae View MSA
122790528 5272 Eudicot View MSA
122043288 5273 Angiosperm View MSA
121347510 5274 Embryophyte View MSA
123426892 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.746        
cufflinks 16.552       Low
cufflinks 26.862     High High
cufflinks 17.929        
cufflinks 22.313        
cufflinks 22.079        

0 Strain