Gene : AT1G78750 A. thaliana TAIR10
Defline:  (1 of 68) PTHR32212//PTHR32212:SF126 - FAMILY NOT NAMED // EMB|CAB62440.1-RELATED Genomic Order:  6849
Name:  ? AT1G78750 Secondary Identifier:  ? PAC:19654085
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G78750 0.5kb upstream 0.5kb upstream 2074 true Chr1: 29613122-29615195 Arabidopsis thaliana
AT1G78750 0.5kb upstream 0.5kb upstream 500 false Chr1: 29614696-29615195 Arabidopsis thaliana
AT1G78750 0.5kb downstream 0.5kb downstream 2074 true Chr1: 29612622-29614695 Arabidopsis thaliana
AT1G78750 0.5kb downstream 0.5kb downstream 500 false Chr1: 29612622-29613121 Arabidopsis thaliana
AT1G78750 1.0kb upstream 1.0kb upstream 2574 true Chr1: 29613122-29615695 Arabidopsis thaliana
AT1G78750 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29614696-29615695 Arabidopsis thaliana
AT1G78750 1.0kb downstream 1.0kb downstream 2574 true Chr1: 29612122-29614695 Arabidopsis thaliana
AT1G78750 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29612122-29613121 Arabidopsis thaliana
AT1G78750 2.0kb upstream 2.0kb upstream 3574 true Chr1: 29613122-29616695 Arabidopsis thaliana
AT1G78750 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29614696-29616695 Arabidopsis thaliana
AT1G78750 2.0kb downstream 2.0kb downstream 3574 true Chr1: 29611122-29614695 Arabidopsis thaliana
AT1G78750 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29611122-29613121 Arabidopsis thaliana
AT1G78750 5.0kb upstream 5.0kb upstream 6574 true Chr1: 29613122-29619695 Arabidopsis thaliana
AT1G78750 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29614696-29619695 Arabidopsis thaliana
AT1G78750 5.0kb downstream 5.0kb downstream 6574 true Chr1: 29608122-29614695 Arabidopsis thaliana
AT1G78750 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29608122-29613121 Arabidopsis thaliana
AT1G78750 10.0kb upstream 10.0kb upstream 11574 true Chr1: 29613122-29624695 Arabidopsis thaliana
AT1G78750 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29614696-29624695 Arabidopsis thaliana
AT1G78750 10.0kb downstream 10.0kb downstream 11574 true Chr1: 29603122-29614695 Arabidopsis thaliana
AT1G78750 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29603122-29613121 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375444 5261 Brassicaceae View MSA
123836849 5264 Brassicales-Malvales View MSA
124350537 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.237     Low  
cufflinks 0.02     Low  
cufflinks 0.227     Low  
cufflinks 0.03     Low  
cufflinks 0.206     Low  
cufflinks 0.01     Low Low

0 Strain