Gene : AT1G78720 A. thaliana TAIR10
Defline:  (1 of 4) K10956 - protein transport protein SEC61 subunit alpha (SEC61A) Genomic Order:  6846
Name:  ? AT1G78720 Secondary Identifier:  ? PAC:19654907
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G78720 0.5kb upstream 0.5kb upstream 2382 true Chr1: 29605129-29607510 Arabidopsis thaliana
AT1G78720 0.5kb upstream 0.5kb upstream 500 false Chr1: 29605129-29605628 Arabidopsis thaliana
AT1G78720 0.5kb downstream 0.5kb downstream 2382 true Chr1: 29605629-29608010 Arabidopsis thaliana
AT1G78720 0.5kb downstream 0.5kb downstream 500 false Chr1: 29607511-29608010 Arabidopsis thaliana
AT1G78720 1.0kb upstream 1.0kb upstream 2882 true Chr1: 29604629-29607510 Arabidopsis thaliana
AT1G78720 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29604629-29605628 Arabidopsis thaliana
AT1G78720 1.0kb downstream 1.0kb downstream 2882 true Chr1: 29605629-29608510 Arabidopsis thaliana
AT1G78720 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29607511-29608510 Arabidopsis thaliana
AT1G78720 2.0kb upstream 2.0kb upstream 3882 true Chr1: 29603629-29607510 Arabidopsis thaliana
AT1G78720 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29603629-29605628 Arabidopsis thaliana
AT1G78720 2.0kb downstream 2.0kb downstream 3882 true Chr1: 29605629-29609510 Arabidopsis thaliana
AT1G78720 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29607511-29609510 Arabidopsis thaliana
AT1G78720 5.0kb upstream 5.0kb upstream 6882 true Chr1: 29600629-29607510 Arabidopsis thaliana
AT1G78720 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29600629-29605628 Arabidopsis thaliana
AT1G78720 5.0kb downstream 5.0kb downstream 6882 true Chr1: 29605629-29612510 Arabidopsis thaliana
AT1G78720 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29607511-29612510 Arabidopsis thaliana
AT1G78720 10.0kb upstream 10.0kb upstream 11882 true Chr1: 29595629-29607510 Arabidopsis thaliana
AT1G78720 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29595629-29605628 Arabidopsis thaliana
AT1G78720 10.0kb downstream 10.0kb downstream 11882 true Chr1: 29605629-29617510 Arabidopsis thaliana
AT1G78720 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29607511-29617510 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657005 5273 Angiosperm View MSA
122338696 5261 Brassicaceae View MSA
123779249 5264 Brassicales-Malvales View MSA
124277579 5266 SBM View MSA
124132767 5268 Malvidae View MSA
124037976 5270 Rosid View MSA
123610591 5271 Pentapetalae View MSA
122645199 5272 Eudicot View MSA
120929060 5274 Embryophyte View MSA
123426638 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.052     Low  
cufflinks 0.072     Low  
cufflinks 0.054     Low  
cufflinks 0.103     Low High
cufflinks 0.023     Low Low
cufflinks 0.092     Low  

0 Strain