Gene : AT1G77670 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11751//PTHR11751:SF317 - SUBGROUP I AMINOTRANSFERASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  6738
Name:  ? AT1G77670 Secondary Identifier:  ? PAC:19649952
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77670 0.5kb upstream 0.5kb upstream 2575 true Chr1: 29188901-29191475 Arabidopsis thaliana
AT1G77670 0.5kb upstream 0.5kb upstream 500 false Chr1: 29190976-29191475 Arabidopsis thaliana
AT1G77670 0.5kb downstream 0.5kb downstream 2575 true Chr1: 29188401-29190975 Arabidopsis thaliana
AT1G77670 0.5kb downstream 0.5kb downstream 500 false Chr1: 29188401-29188900 Arabidopsis thaliana
AT1G77670 1.0kb upstream 1.0kb upstream 3075 true Chr1: 29188901-29191975 Arabidopsis thaliana
AT1G77670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29190976-29191975 Arabidopsis thaliana
AT1G77670 1.0kb downstream 1.0kb downstream 3075 true Chr1: 29187901-29190975 Arabidopsis thaliana
AT1G77670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29187901-29188900 Arabidopsis thaliana
AT1G77670 2.0kb upstream 2.0kb upstream 4075 true Chr1: 29188901-29192975 Arabidopsis thaliana
AT1G77670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29190976-29192975 Arabidopsis thaliana
AT1G77670 2.0kb downstream 2.0kb downstream 4075 true Chr1: 29186901-29190975 Arabidopsis thaliana
AT1G77670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29186901-29188900 Arabidopsis thaliana
AT1G77670 5.0kb upstream 5.0kb upstream 7075 true Chr1: 29188901-29195975 Arabidopsis thaliana
AT1G77670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29190976-29195975 Arabidopsis thaliana
AT1G77670 5.0kb downstream 5.0kb downstream 7075 true Chr1: 29183901-29190975 Arabidopsis thaliana
AT1G77670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29183901-29188900 Arabidopsis thaliana
AT1G77670 10.0kb upstream 10.0kb upstream 12075 true Chr1: 29188901-29200975 Arabidopsis thaliana
AT1G77670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29190976-29200975 Arabidopsis thaliana
AT1G77670 10.0kb downstream 10.0kb downstream 12075 true Chr1: 29178901-29190975 Arabidopsis thaliana
AT1G77670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29178901-29188900 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360512 5261 Brassicaceae View MSA
123829276 5264 Brassicales-Malvales View MSA
124344804 5266 SBM View MSA
124247582 5268 Malvidae View MSA
124063463 5270 Rosid View MSA
123739507 5271 Pentapetalae View MSA
122790379 5272 Eudicot View MSA
122042805 5273 Angiosperm View MSA
121346354 5274 Embryophyte View MSA
123424260 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.857       High
cufflinks 5.041       Low
cufflinks 10.029        
cufflinks 6.368        
cufflinks 8.451        
cufflinks 7.481        

0 Strain