Gene : AT1G79200 A. thaliana TAIR10
Genomic Order:  6900 Name:  ? AT1G79200
Secondary Identifier:  ? PAC:19655605
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79200 0.5kb upstream 0.5kb upstream 2154 true Chr1: 29793887-29796040 Arabidopsis thaliana
AT1G79200 0.5kb upstream 0.5kb upstream 500 false Chr1: 29793887-29794386 Arabidopsis thaliana
AT1G79200 0.5kb downstream 0.5kb downstream 2154 true Chr1: 29794387-29796540 Arabidopsis thaliana
AT1G79200 0.5kb downstream 0.5kb downstream 500 false Chr1: 29796041-29796540 Arabidopsis thaliana
AT1G79200 1.0kb upstream 1.0kb upstream 2654 true Chr1: 29793387-29796040 Arabidopsis thaliana
AT1G79200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29793387-29794386 Arabidopsis thaliana
AT1G79200 1.0kb downstream 1.0kb downstream 2654 true Chr1: 29794387-29797040 Arabidopsis thaliana
AT1G79200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29796041-29797040 Arabidopsis thaliana
AT1G79200 2.0kb upstream 2.0kb upstream 3654 true Chr1: 29792387-29796040 Arabidopsis thaliana
AT1G79200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29792387-29794386 Arabidopsis thaliana
AT1G79200 2.0kb downstream 2.0kb downstream 3654 true Chr1: 29794387-29798040 Arabidopsis thaliana
AT1G79200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29796041-29798040 Arabidopsis thaliana
AT1G79200 5.0kb upstream 5.0kb upstream 6654 true Chr1: 29789387-29796040 Arabidopsis thaliana
AT1G79200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29789387-29794386 Arabidopsis thaliana
AT1G79200 5.0kb downstream 5.0kb downstream 6654 true Chr1: 29794387-29801040 Arabidopsis thaliana
AT1G79200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29796041-29801040 Arabidopsis thaliana
AT1G79200 10.0kb upstream 10.0kb upstream 11654 true Chr1: 29784387-29796040 Arabidopsis thaliana
AT1G79200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29784387-29794386 Arabidopsis thaliana
AT1G79200 10.0kb downstream 10.0kb downstream 11654 true Chr1: 29794387-29806040 Arabidopsis thaliana
AT1G79200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29796041-29806040 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026396 5273 Angiosperm View MSA
122372719 5261 Brassicaceae View MSA
123835439 5264 Brassicales-Malvales View MSA
124345180 5266 SBM View MSA
124244589 5268 Malvidae View MSA
124065900 5270 Rosid View MSA
123738543 5271 Pentapetalae View MSA
122790155 5272 Eudicot View MSA
121296309 5274 Embryophyte View MSA
123334495 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.575        
cufflinks 8.362        
cufflinks 4.221       Low
cufflinks 8.736        
cufflinks 4.011       Low
cufflinks 8.566        

0 Strain