Gene : AT1G76530 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31651//PTHR31651:SF5 - FAMILY NOT NAMED // AUXIN EFFLUX CARRIER FAMILY PROTEIN-RELATED Genomic Order:  6617
Name:  ? AT1G76530 Secondary Identifier:  ? PAC:19649555
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G76530 0.5kb upstream 0.5kb upstream 2659 true Chr1: 28717713-28720371 Arabidopsis thaliana
AT1G76530 0.5kb upstream 0.5kb upstream 500 false Chr1: 28717713-28718212 Arabidopsis thaliana
AT1G76530 0.5kb downstream 0.5kb downstream 2659 true Chr1: 28718213-28720871 Arabidopsis thaliana
AT1G76530 0.5kb downstream 0.5kb downstream 500 false Chr1: 28720372-28720871 Arabidopsis thaliana
AT1G76530 1.0kb upstream 1.0kb upstream 3159 true Chr1: 28717213-28720371 Arabidopsis thaliana
AT1G76530 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28717213-28718212 Arabidopsis thaliana
AT1G76530 1.0kb downstream 1.0kb downstream 3159 true Chr1: 28718213-28721371 Arabidopsis thaliana
AT1G76530 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28720372-28721371 Arabidopsis thaliana
AT1G76530 2.0kb upstream 2.0kb upstream 4159 true Chr1: 28716213-28720371 Arabidopsis thaliana
AT1G76530 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28716213-28718212 Arabidopsis thaliana
AT1G76530 2.0kb downstream 2.0kb downstream 4159 true Chr1: 28718213-28722371 Arabidopsis thaliana
AT1G76530 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28720372-28722371 Arabidopsis thaliana
AT1G76530 5.0kb upstream 5.0kb upstream 7159 true Chr1: 28713213-28720371 Arabidopsis thaliana
AT1G76530 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28713213-28718212 Arabidopsis thaliana
AT1G76530 5.0kb downstream 5.0kb downstream 7159 true Chr1: 28718213-28725371 Arabidopsis thaliana
AT1G76530 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28720372-28725371 Arabidopsis thaliana
AT1G76530 10.0kb upstream 10.0kb upstream 12159 true Chr1: 28708213-28720371 Arabidopsis thaliana
AT1G76530 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28708213-28718212 Arabidopsis thaliana
AT1G76530 10.0kb downstream 10.0kb downstream 12159 true Chr1: 28718213-28730371 Arabidopsis thaliana
AT1G76530 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28720372-28730371 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026446 5273 Angiosperm View MSA
122328369 5261 Brassicaceae Singleton cluster - no MSA
123769728 5264 Brassicales-Malvales Singleton cluster - no MSA
124268281 5266 SBM Singleton cluster - no MSA
124255182 5268 Malvidae View MSA
124070797 5270 Rosid View MSA
123751038 5271 Pentapetalae View MSA
122794652 5272 Eudicot View MSA
123429004 5275 Viridiplantae View MSA
121349316 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.435        
cufflinks 0.014     Low  
cufflinks 3.295       High
cufflinks 0.014     Low  
cufflinks 2.723        
cufflinks 0.007     Low Low

0 Strain