Gene : AT1G76050 A. thaliana TAIR10
Defline:  (1 of 1) 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase Genomic Order:  6567
Name:  ? AT1G76050 Secondary Identifier:  ? PAC:19649968
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G76050 0.5kb upstream 0.5kb upstream 2905 true Chr1: 28540323-28543227 Arabidopsis thaliana
AT1G76050 0.5kb upstream 0.5kb upstream 500 false Chr1: 28540323-28540822 Arabidopsis thaliana
AT1G76050 0.5kb downstream 0.5kb downstream 2905 true Chr1: 28540823-28543727 Arabidopsis thaliana
AT1G76050 0.5kb downstream 0.5kb downstream 500 false Chr1: 28543228-28543727 Arabidopsis thaliana
AT1G76050 1.0kb upstream 1.0kb upstream 3405 true Chr1: 28539823-28543227 Arabidopsis thaliana
AT1G76050 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28539823-28540822 Arabidopsis thaliana
AT1G76050 1.0kb downstream 1.0kb downstream 3405 true Chr1: 28540823-28544227 Arabidopsis thaliana
AT1G76050 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28543228-28544227 Arabidopsis thaliana
AT1G76050 2.0kb upstream 2.0kb upstream 4405 true Chr1: 28538823-28543227 Arabidopsis thaliana
AT1G76050 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28538823-28540822 Arabidopsis thaliana
AT1G76050 2.0kb downstream 2.0kb downstream 4405 true Chr1: 28540823-28545227 Arabidopsis thaliana
AT1G76050 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28543228-28545227 Arabidopsis thaliana
AT1G76050 5.0kb upstream 5.0kb upstream 7405 true Chr1: 28535823-28543227 Arabidopsis thaliana
AT1G76050 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28535823-28540822 Arabidopsis thaliana
AT1G76050 5.0kb downstream 5.0kb downstream 7405 true Chr1: 28540823-28548227 Arabidopsis thaliana
AT1G76050 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28543228-28548227 Arabidopsis thaliana
AT1G76050 10.0kb upstream 10.0kb upstream 12405 true Chr1: 28530823-28543227 Arabidopsis thaliana
AT1G76050 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28530823-28540822 Arabidopsis thaliana
AT1G76050 10.0kb downstream 10.0kb downstream 12405 true Chr1: 28540823-28553227 Arabidopsis thaliana
AT1G76050 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28543228-28553227 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366345 5261 Brassicaceae View MSA
123827875 5264 Brassicales-Malvales View MSA
124340786 5266 SBM View MSA
124242022 5268 Malvidae View MSA
124067698 5270 Rosid View MSA
123740494 5271 Pentapetalae View MSA
122788913 5272 Eudicot View MSA
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.903        
cufflinks 4.022        
cufflinks 5.88        
cufflinks 3.456        
cufflinks 5.49        
cufflinks 2.853       Low

0 Strain