Gene : SRS5 A. thaliana TAIR10
Primary Identifier:  ? AT1G75520 Defline:  (1 of 5) PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED
Genomic Order:  6519 Name:  ? AT1G75520
Secondary Identifier:  ? PAC:19650251
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G75520 0.5kb upstream 0.5kb upstream 2434 true Chr1: 28351562-28353995 Arabidopsis thaliana
AT1G75520 0.5kb upstream 0.5kb upstream 500 false Chr1: 28353496-28353995 Arabidopsis thaliana
AT1G75520 0.5kb downstream 0.5kb downstream 2434 true Chr1: 28351062-28353495 Arabidopsis thaliana
AT1G75520 0.5kb downstream 0.5kb downstream 500 false Chr1: 28351062-28351561 Arabidopsis thaliana
AT1G75520 1.0kb upstream 1.0kb upstream 2934 true Chr1: 28351562-28354495 Arabidopsis thaliana
AT1G75520 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28353496-28354495 Arabidopsis thaliana
AT1G75520 1.0kb downstream 1.0kb downstream 2934 true Chr1: 28350562-28353495 Arabidopsis thaliana
AT1G75520 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28350562-28351561 Arabidopsis thaliana
AT1G75520 2.0kb upstream 2.0kb upstream 3934 true Chr1: 28351562-28355495 Arabidopsis thaliana
AT1G75520 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28353496-28355495 Arabidopsis thaliana
AT1G75520 2.0kb downstream 2.0kb downstream 3934 true Chr1: 28349562-28353495 Arabidopsis thaliana
AT1G75520 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28349562-28351561 Arabidopsis thaliana
AT1G75520 5.0kb upstream 5.0kb upstream 6934 true Chr1: 28351562-28358495 Arabidopsis thaliana
AT1G75520 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28353496-28358495 Arabidopsis thaliana
AT1G75520 5.0kb downstream 5.0kb downstream 6934 true Chr1: 28346562-28353495 Arabidopsis thaliana
AT1G75520 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28346562-28351561 Arabidopsis thaliana
AT1G75520 10.0kb upstream 10.0kb upstream 11934 true Chr1: 28351562-28363495 Arabidopsis thaliana
AT1G75520 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28353496-28363495 Arabidopsis thaliana
AT1G75520 10.0kb downstream 10.0kb downstream 11934 true Chr1: 28341562-28353495 Arabidopsis thaliana
AT1G75520 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28341562-28351561 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364032 5261 Brassicaceae View MSA
123838633 5264 Brassicales-Malvales View MSA
124340064 5266 SBM View MSA
124251663 5268 Malvidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.238     Low  
cufflinks 4.11        
cufflinks 0.114     Low Low
cufflinks 5.931       High
cufflinks 0.164     Low  
cufflinks 1.72        

0 Strain