Gene : RPS9 A. thaliana TAIR10
Primary Identifier:  ? AT1G74970 Defline:  (1 of 1) PTHR21569:SF2 - 30S RIBOSOMAL PROTEIN S9, CHLOROPLASTIC
Genomic Order:  6466 Name:  ? AT1G74970
Secondary Identifier:  ? PAC:19657808
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G74970 0.5kb upstream 0.5kb upstream 2273 true Chr1: 28157530-28159802 Arabidopsis thaliana
AT1G74970 0.5kb upstream 0.5kb upstream 500 false Chr1: 28159303-28159802 Arabidopsis thaliana
AT1G74970 0.5kb downstream 0.5kb downstream 2273 true Chr1: 28157030-28159302 Arabidopsis thaliana
AT1G74970 0.5kb downstream 0.5kb downstream 500 false Chr1: 28157030-28157529 Arabidopsis thaliana
AT1G74970 1.0kb upstream 1.0kb upstream 2773 true Chr1: 28157530-28160302 Arabidopsis thaliana
AT1G74970 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28159303-28160302 Arabidopsis thaliana
AT1G74970 1.0kb downstream 1.0kb downstream 2773 true Chr1: 28156530-28159302 Arabidopsis thaliana
AT1G74970 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28156530-28157529 Arabidopsis thaliana
AT1G74970 2.0kb upstream 2.0kb upstream 3773 true Chr1: 28157530-28161302 Arabidopsis thaliana
AT1G74970 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28159303-28161302 Arabidopsis thaliana
AT1G74970 2.0kb downstream 2.0kb downstream 3773 true Chr1: 28155530-28159302 Arabidopsis thaliana
AT1G74970 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28155530-28157529 Arabidopsis thaliana
AT1G74970 5.0kb upstream 5.0kb upstream 6773 true Chr1: 28157530-28164302 Arabidopsis thaliana
AT1G74970 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28159303-28164302 Arabidopsis thaliana
AT1G74970 5.0kb downstream 5.0kb downstream 6773 true Chr1: 28152530-28159302 Arabidopsis thaliana
AT1G74970 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28152530-28157529 Arabidopsis thaliana
AT1G74970 10.0kb upstream 10.0kb upstream 11773 true Chr1: 28157530-28169302 Arabidopsis thaliana
AT1G74970 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28159303-28169302 Arabidopsis thaliana
AT1G74970 10.0kb downstream 10.0kb downstream 11773 true Chr1: 28147530-28159302 Arabidopsis thaliana
AT1G74970 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28147530-28157529 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370868 5261 Brassicaceae View MSA
123828776 5264 Brassicales-Malvales View MSA
124340174 5266 SBM View MSA
124242148 5268 Malvidae View MSA
124063747 5270 Rosid View MSA
123737620 5271 Pentapetalae View MSA
122790532 5272 Eudicot View MSA
122043582 5273 Angiosperm View MSA
121345989 5274 Embryophyte View MSA
123426879 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 91.17     High  
cufflinks 11.071        
cufflinks 118.392     High High
cufflinks 9.066        
cufflinks 80.331     High  
cufflinks 9.572        

0 Strain