Gene : AT1G74470 A. thaliana TAIR10
Defline:  (1 of 1) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Genomic Order:  6417
Name:  ? AT1G74470 Secondary Identifier:  ? PAC:19650147
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5063 Arabidopsis thaliana pathologic  
Athaliana PWY-5064 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G74470 0.5kb upstream 0.5kb upstream 2342 true Chr1: 27990665-27993006 Arabidopsis thaliana
AT1G74470 0.5kb upstream 0.5kb upstream 500 false Chr1: 27990665-27991164 Arabidopsis thaliana
AT1G74470 0.5kb downstream 0.5kb downstream 2342 true Chr1: 27991165-27993506 Arabidopsis thaliana
AT1G74470 0.5kb downstream 0.5kb downstream 500 false Chr1: 27993007-27993506 Arabidopsis thaliana
AT1G74470 1.0kb upstream 1.0kb upstream 2842 true Chr1: 27990165-27993006 Arabidopsis thaliana
AT1G74470 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27990165-27991164 Arabidopsis thaliana
AT1G74470 1.0kb downstream 1.0kb downstream 2842 true Chr1: 27991165-27994006 Arabidopsis thaliana
AT1G74470 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27993007-27994006 Arabidopsis thaliana
AT1G74470 2.0kb upstream 2.0kb upstream 3842 true Chr1: 27989165-27993006 Arabidopsis thaliana
AT1G74470 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27989165-27991164 Arabidopsis thaliana
AT1G74470 2.0kb downstream 2.0kb downstream 3842 true Chr1: 27991165-27995006 Arabidopsis thaliana
AT1G74470 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27993007-27995006 Arabidopsis thaliana
AT1G74470 5.0kb upstream 5.0kb upstream 6842 true Chr1: 27986165-27993006 Arabidopsis thaliana
AT1G74470 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27986165-27991164 Arabidopsis thaliana
AT1G74470 5.0kb downstream 5.0kb downstream 6842 true Chr1: 27991165-27998006 Arabidopsis thaliana
AT1G74470 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27993007-27998006 Arabidopsis thaliana
AT1G74470 10.0kb upstream 10.0kb upstream 11842 true Chr1: 27981165-27993006 Arabidopsis thaliana
AT1G74470 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27981165-27991164 Arabidopsis thaliana
AT1G74470 10.0kb downstream 10.0kb downstream 11842 true Chr1: 27991165-28003006 Arabidopsis thaliana
AT1G74470 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27993007-28003006 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368864 5261 Brassicaceae View MSA
123831426 5264 Brassicales-Malvales View MSA
124345987 5266 SBM View MSA
124242880 5268 Malvidae View MSA
124070478 5270 Rosid View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 537.393     High  
cufflinks 17.236        
cufflinks 847.12     High  
cufflinks 16.399        
cufflinks 1017.533     High High
cufflinks 9.952       Low

0 Strain