Gene : AT1G71870 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11206:SF75 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  6143
Name:  ? AT1G71870 Secondary Identifier:  ? PAC:19655634
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71870 0.5kb upstream 0.5kb upstream 2940 true Chr1: 27032456-27035395 Arabidopsis thaliana
AT1G71870 0.5kb upstream 0.5kb upstream 500 false Chr1: 27034896-27035395 Arabidopsis thaliana
AT1G71870 0.5kb downstream 0.5kb downstream 2940 true Chr1: 27031956-27034895 Arabidopsis thaliana
AT1G71870 0.5kb downstream 0.5kb downstream 500 false Chr1: 27031956-27032455 Arabidopsis thaliana
AT1G71870 1.0kb upstream 1.0kb upstream 3440 true Chr1: 27032456-27035895 Arabidopsis thaliana
AT1G71870 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27034896-27035895 Arabidopsis thaliana
AT1G71870 1.0kb downstream 1.0kb downstream 3440 true Chr1: 27031456-27034895 Arabidopsis thaliana
AT1G71870 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27031456-27032455 Arabidopsis thaliana
AT1G71870 2.0kb upstream 2.0kb upstream 4440 true Chr1: 27032456-27036895 Arabidopsis thaliana
AT1G71870 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27034896-27036895 Arabidopsis thaliana
AT1G71870 2.0kb downstream 2.0kb downstream 4440 true Chr1: 27030456-27034895 Arabidopsis thaliana
AT1G71870 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27030456-27032455 Arabidopsis thaliana
AT1G71870 5.0kb upstream 5.0kb upstream 7440 true Chr1: 27032456-27039895 Arabidopsis thaliana
AT1G71870 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27034896-27039895 Arabidopsis thaliana
AT1G71870 5.0kb downstream 5.0kb downstream 7440 true Chr1: 27027456-27034895 Arabidopsis thaliana
AT1G71870 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27027456-27032455 Arabidopsis thaliana
AT1G71870 10.0kb upstream 10.0kb upstream 12440 true Chr1: 27032456-27044895 Arabidopsis thaliana
AT1G71870 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27034896-27044895 Arabidopsis thaliana
AT1G71870 10.0kb downstream 10.0kb downstream 12440 true Chr1: 27022456-27034895 Arabidopsis thaliana
AT1G71870 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27022456-27032455 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370279 5261 Brassicaceae View MSA
123833275 5264 Brassicales-Malvales View MSA
124344105 5266 SBM View MSA
124253972 5268 Malvidae View MSA
124062367 5270 Rosid View MSA
123750437 5271 Pentapetalae View MSA
122790105 5272 Eudicot View MSA
122045079 5273 Angiosperm View MSA
121345520 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.828        
cufflinks 13.027        
cufflinks 0.87        
cufflinks 10.108        
cufflinks 0.711        
cufflinks 12.497        

0 Strain