Gene : AT2G03640 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Genomic Order:  259
Name:  ? AT2G03640 Secondary Identifier:  ? PAC:19638961
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G03640 0.5kb upstream 0.5kb upstream 3061 true Chr2: 1104307-1107367 Arabidopsis thaliana
AT2G03640 0.5kb upstream 0.5kb upstream 500 false Chr2: 1106868-1107367 Arabidopsis thaliana
AT2G03640 0.5kb downstream 0.5kb downstream 3061 true Chr2: 1103807-1106867 Arabidopsis thaliana
AT2G03640 0.5kb downstream 0.5kb downstream 500 false Chr2: 1103807-1104306 Arabidopsis thaliana
AT2G03640 1.0kb upstream 1.0kb upstream 3561 true Chr2: 1104307-1107867 Arabidopsis thaliana
AT2G03640 1.0kb upstream 1.0kb upstream 1000 false Chr2: 1106868-1107867 Arabidopsis thaliana
AT2G03640 1.0kb downstream 1.0kb downstream 3561 true Chr2: 1103307-1106867 Arabidopsis thaliana
AT2G03640 1.0kb downstream 1.0kb downstream 1000 false Chr2: 1103307-1104306 Arabidopsis thaliana
AT2G03640 2.0kb upstream 2.0kb upstream 4561 true Chr2: 1104307-1108867 Arabidopsis thaliana
AT2G03640 2.0kb upstream 2.0kb upstream 2000 false Chr2: 1106868-1108867 Arabidopsis thaliana
AT2G03640 2.0kb downstream 2.0kb downstream 4561 true Chr2: 1102307-1106867 Arabidopsis thaliana
AT2G03640 2.0kb downstream 2.0kb downstream 2000 false Chr2: 1102307-1104306 Arabidopsis thaliana
AT2G03640 5.0kb upstream 5.0kb upstream 7561 true Chr2: 1104307-1111867 Arabidopsis thaliana
AT2G03640 5.0kb upstream 5.0kb upstream 5000 false Chr2: 1106868-1111867 Arabidopsis thaliana
AT2G03640 5.0kb downstream 5.0kb downstream 7561 true Chr2: 1099307-1106867 Arabidopsis thaliana
AT2G03640 5.0kb downstream 5.0kb downstream 5000 false Chr2: 1099307-1104306 Arabidopsis thaliana
AT2G03640 10.0kb upstream 10.0kb upstream 12561 true Chr2: 1104307-1116867 Arabidopsis thaliana
AT2G03640 10.0kb upstream 10.0kb upstream 10000 false Chr2: 1106868-1116867 Arabidopsis thaliana
AT2G03640 10.0kb downstream 10.0kb downstream 12561 true Chr2: 1094307-1106867 Arabidopsis thaliana
AT2G03640 10.0kb downstream 10.0kb downstream 10000 false Chr2: 1094307-1104306 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373322 5261 Brassicaceae View MSA
123839234 5264 Brassicales-Malvales View MSA
124322585 5266 SBM View MSA
124253817 5268 Malvidae View MSA
124070986 5270 Rosid View MSA
123751309 5271 Pentapetalae View MSA
122795066 5272 Eudicot View MSA
122049730 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.516       High
cufflinks 5.244        
cufflinks 4.964       Low
cufflinks 6.086        
cufflinks 6.163        
cufflinks 5.465        

0 Strain