Gene : AGL30 A. thaliana TAIR10
Primary Identifier:  ? AT2G03060 Defline:  (1 of 2) PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN
Genomic Order:  204 Name:  ? AT2G03060
Secondary Identifier:  ? PAC:19640478
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G03060 0.5kb upstream 0.5kb upstream 3507 true Chr2: 900643-904149 Arabidopsis thaliana
AT2G03060 0.5kb upstream 0.5kb upstream 500 false Chr2: 900643-901142 Arabidopsis thaliana
AT2G03060 0.5kb downstream 0.5kb downstream 3507 true Chr2: 901143-904649 Arabidopsis thaliana
AT2G03060 0.5kb downstream 0.5kb downstream 500 false Chr2: 904150-904649 Arabidopsis thaliana
AT2G03060 1.0kb upstream 1.0kb upstream 4007 true Chr2: 900143-904149 Arabidopsis thaliana
AT2G03060 1.0kb upstream 1.0kb upstream 1000 false Chr2: 900143-901142 Arabidopsis thaliana
AT2G03060 1.0kb downstream 1.0kb downstream 4007 true Chr2: 901143-905149 Arabidopsis thaliana
AT2G03060 1.0kb downstream 1.0kb downstream 1000 false Chr2: 904150-905149 Arabidopsis thaliana
AT2G03060 2.0kb upstream 2.0kb upstream 5007 true Chr2: 899143-904149 Arabidopsis thaliana
AT2G03060 2.0kb upstream 2.0kb upstream 2000 false Chr2: 899143-901142 Arabidopsis thaliana
AT2G03060 2.0kb downstream 2.0kb downstream 5007 true Chr2: 901143-906149 Arabidopsis thaliana
AT2G03060 2.0kb downstream 2.0kb downstream 2000 false Chr2: 904150-906149 Arabidopsis thaliana
AT2G03060 5.0kb upstream 5.0kb upstream 8007 true Chr2: 896143-904149 Arabidopsis thaliana
AT2G03060 5.0kb upstream 5.0kb upstream 5000 false Chr2: 896143-901142 Arabidopsis thaliana
AT2G03060 5.0kb downstream 5.0kb downstream 8007 true Chr2: 901143-909149 Arabidopsis thaliana
AT2G03060 5.0kb downstream 5.0kb downstream 5000 false Chr2: 904150-909149 Arabidopsis thaliana
AT2G03060 10.0kb upstream 10.0kb upstream 13007 true Chr2: 891143-904149 Arabidopsis thaliana
AT2G03060 10.0kb upstream 10.0kb upstream 10000 false Chr2: 891143-901142 Arabidopsis thaliana
AT2G03060 10.0kb downstream 10.0kb downstream 13007 true Chr2: 901143-914149 Arabidopsis thaliana
AT2G03060 10.0kb downstream 10.0kb downstream 10000 false Chr2: 904150-914149 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370979 5261 Brassicaceae View MSA
123840542 5264 Brassicales-Malvales View MSA
124342188 5266 SBM View MSA
124239260 5268 Malvidae View MSA
124062317 5270 Rosid View MSA
123742642 5271 Pentapetalae View MSA
122791202 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.161        
cufflinks 1.55       High
cufflinks 1.265        
cufflinks 1.208        
cufflinks 1.265        
cufflinks 1.263        

0 Strain