Gene : AT2G01600 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22951//PTHR22951:SF25 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  59
Name:  ? AT2G01600 Secondary Identifier:  ? PAC:19642651
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01600 0.5kb upstream 0.5kb upstream 4293 true Chr2: 268318-272610 Arabidopsis thaliana
AT2G01600 0.5kb upstream 0.5kb upstream 500 false Chr2: 268318-268817 Arabidopsis thaliana
AT2G01600 0.5kb downstream 0.5kb downstream 4293 true Chr2: 268818-273110 Arabidopsis thaliana
AT2G01600 0.5kb downstream 0.5kb downstream 500 false Chr2: 272611-273110 Arabidopsis thaliana
AT2G01600 1.0kb upstream 1.0kb upstream 4793 true Chr2: 267818-272610 Arabidopsis thaliana
AT2G01600 1.0kb upstream 1.0kb upstream 1000 false Chr2: 267818-268817 Arabidopsis thaliana
AT2G01600 1.0kb downstream 1.0kb downstream 4793 true Chr2: 268818-273610 Arabidopsis thaliana
AT2G01600 1.0kb downstream 1.0kb downstream 1000 false Chr2: 272611-273610 Arabidopsis thaliana
AT2G01600 2.0kb upstream 2.0kb upstream 5793 true Chr2: 266818-272610 Arabidopsis thaliana
AT2G01600 2.0kb upstream 2.0kb upstream 2000 false Chr2: 266818-268817 Arabidopsis thaliana
AT2G01600 2.0kb downstream 2.0kb downstream 5793 true Chr2: 268818-274610 Arabidopsis thaliana
AT2G01600 2.0kb downstream 2.0kb downstream 2000 false Chr2: 272611-274610 Arabidopsis thaliana
AT2G01600 5.0kb upstream 5.0kb upstream 8793 true Chr2: 263818-272610 Arabidopsis thaliana
AT2G01600 5.0kb upstream 5.0kb upstream 5000 false Chr2: 263818-268817 Arabidopsis thaliana
AT2G01600 5.0kb downstream 5.0kb downstream 8793 true Chr2: 268818-277610 Arabidopsis thaliana
AT2G01600 5.0kb downstream 5.0kb downstream 5000 false Chr2: 272611-277610 Arabidopsis thaliana
AT2G01600 10.0kb upstream 10.0kb upstream 13793 true Chr2: 258818-272610 Arabidopsis thaliana
AT2G01600 10.0kb upstream 10.0kb upstream 10000 false Chr2: 258818-268817 Arabidopsis thaliana
AT2G01600 10.0kb downstream 10.0kb downstream 13793 true Chr2: 268818-282610 Arabidopsis thaliana
AT2G01600 10.0kb downstream 10.0kb downstream 10000 false Chr2: 272611-282610 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381513 5261 Brassicaceae View MSA
123831008 5264 Brassicales-Malvales View MSA
124338135 5266 SBM View MSA
124249678 5268 Malvidae View MSA
124061659 5270 Rosid View MSA
123746674 5271 Pentapetalae View MSA
122789096 5272 Eudicot View MSA
122049842 5273 Angiosperm View MSA
123428889 5275 Viridiplantae View MSA
121349660 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.092        
cufflinks 24.064        
cufflinks 13.273       Low
cufflinks 28.621       High
cufflinks 16.367        
cufflinks 26.162        

0 Strain