Gene : PP2-B8 A. thaliana TAIR10
Primary Identifier:  ? AT2G02340 Defline:  (1 of 8) PTHR32278//PTHR32278:SF6 - FAMILY NOT NAMED // F-BOX PROTEIN PP2-B1-RELATED
Genomic Order:  137 Name:  ? AT2G02340
Secondary Identifier:  ? PAC:19639125
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G02340 0.5kb upstream 0.5kb upstream 1687 true Chr2: 616088-617774 Arabidopsis thaliana
AT2G02340 0.5kb upstream 0.5kb upstream 500 false Chr2: 617275-617774 Arabidopsis thaliana
AT2G02340 0.5kb downstream 0.5kb downstream 1687 true Chr2: 615588-617274 Arabidopsis thaliana
AT2G02340 0.5kb downstream 0.5kb downstream 500 false Chr2: 615588-616087 Arabidopsis thaliana
AT2G02340 1.0kb upstream 1.0kb upstream 2187 true Chr2: 616088-618274 Arabidopsis thaliana
AT2G02340 1.0kb upstream 1.0kb upstream 1000 false Chr2: 617275-618274 Arabidopsis thaliana
AT2G02340 1.0kb downstream 1.0kb downstream 2187 true Chr2: 615088-617274 Arabidopsis thaliana
AT2G02340 1.0kb downstream 1.0kb downstream 1000 false Chr2: 615088-616087 Arabidopsis thaliana
AT2G02340 2.0kb upstream 2.0kb upstream 3187 true Chr2: 616088-619274 Arabidopsis thaliana
AT2G02340 2.0kb upstream 2.0kb upstream 2000 false Chr2: 617275-619274 Arabidopsis thaliana
AT2G02340 2.0kb downstream 2.0kb downstream 3187 true Chr2: 614088-617274 Arabidopsis thaliana
AT2G02340 2.0kb downstream 2.0kb downstream 2000 false Chr2: 614088-616087 Arabidopsis thaliana
AT2G02340 5.0kb upstream 5.0kb upstream 6187 true Chr2: 616088-622274 Arabidopsis thaliana
AT2G02340 5.0kb upstream 5.0kb upstream 5000 false Chr2: 617275-622274 Arabidopsis thaliana
AT2G02340 5.0kb downstream 5.0kb downstream 6187 true Chr2: 611088-617274 Arabidopsis thaliana
AT2G02340 5.0kb downstream 5.0kb downstream 5000 false Chr2: 611088-616087 Arabidopsis thaliana
AT2G02340 10.0kb upstream 10.0kb upstream 11187 true Chr2: 616088-627274 Arabidopsis thaliana
AT2G02340 10.0kb upstream 10.0kb upstream 10000 false Chr2: 617275-627274 Arabidopsis thaliana
AT2G02340 10.0kb downstream 10.0kb downstream 11187 true Chr2: 606088-617274 Arabidopsis thaliana
AT2G02340 10.0kb downstream 10.0kb downstream 10000 false Chr2: 606088-616087 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338228 5261 Brassicaceae View MSA
123778834 5264 Brassicales-Malvales View MSA
124349755 5266 SBM View MSA
124251424 5268 Malvidae View MSA
124073943 5270 Rosid View MSA
123752990 5271 Pentapetalae View MSA
122797907 5272 Eudicot View MSA
122050927 5273 Angiosperm View MSA
121349666 5274 Embryophyte View MSA
123381391 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.722       High
cufflinks 0.129     Low  
cufflinks 0.052     Low Low
cufflinks 0.693       High
cufflinks 0.125     Low  
cufflinks 0.313     Low  

0 Strain