Gene : AT2G15690 A. thaliana TAIR10
Defline:  (1 of 3) PF13041//PF14432 - PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  814
Name:  ? AT2G15690 Secondary Identifier:  ? PAC:19642113
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G15690 0.5kb upstream 0.5kb upstream 3283 true Chr2: 6830995-6834277 Arabidopsis thaliana
AT2G15690 0.5kb upstream 0.5kb upstream 500 false Chr2: 6833778-6834277 Arabidopsis thaliana
AT2G15690 0.5kb downstream 0.5kb downstream 3283 true Chr2: 6830495-6833777 Arabidopsis thaliana
AT2G15690 0.5kb downstream 0.5kb downstream 500 false Chr2: 6830495-6830994 Arabidopsis thaliana
AT2G15690 1.0kb upstream 1.0kb upstream 3783 true Chr2: 6830995-6834777 Arabidopsis thaliana
AT2G15690 1.0kb upstream 1.0kb upstream 1000 false Chr2: 6833778-6834777 Arabidopsis thaliana
AT2G15690 1.0kb downstream 1.0kb downstream 3783 true Chr2: 6829995-6833777 Arabidopsis thaliana
AT2G15690 1.0kb downstream 1.0kb downstream 1000 false Chr2: 6829995-6830994 Arabidopsis thaliana
AT2G15690 2.0kb upstream 2.0kb upstream 4783 true Chr2: 6830995-6835777 Arabidopsis thaliana
AT2G15690 2.0kb upstream 2.0kb upstream 2000 false Chr2: 6833778-6835777 Arabidopsis thaliana
AT2G15690 2.0kb downstream 2.0kb downstream 4783 true Chr2: 6828995-6833777 Arabidopsis thaliana
AT2G15690 2.0kb downstream 2.0kb downstream 2000 false Chr2: 6828995-6830994 Arabidopsis thaliana
AT2G15690 5.0kb upstream 5.0kb upstream 7783 true Chr2: 6830995-6838777 Arabidopsis thaliana
AT2G15690 5.0kb upstream 5.0kb upstream 5000 false Chr2: 6833778-6838777 Arabidopsis thaliana
AT2G15690 5.0kb downstream 5.0kb downstream 7783 true Chr2: 6825995-6833777 Arabidopsis thaliana
AT2G15690 5.0kb downstream 5.0kb downstream 5000 false Chr2: 6825995-6830994 Arabidopsis thaliana
AT2G15690 10.0kb upstream 10.0kb upstream 12783 true Chr2: 6830995-6843777 Arabidopsis thaliana
AT2G15690 10.0kb upstream 10.0kb upstream 10000 false Chr2: 6833778-6843777 Arabidopsis thaliana
AT2G15690 10.0kb downstream 10.0kb downstream 12783 true Chr2: 6820995-6833777 Arabidopsis thaliana
AT2G15690 10.0kb downstream 10.0kb downstream 10000 false Chr2: 6820995-6830994 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371799 5261 Brassicaceae View MSA
123830283 5264 Brassicales-Malvales View MSA
124339198 5266 SBM View MSA
124240083 5268 Malvidae View MSA
124068525 5270 Rosid View MSA
123750280 5271 Pentapetalae View MSA
122796437 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.208        
cufflinks 7.373        
cufflinks 6.99        
cufflinks 7.455        
cufflinks 5.422       Low
cufflinks 8.843       High

0 Strain