Gene : AT2G15680 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  813
Name:  ? AT2G15680 Secondary Identifier:  ? PAC:19641626
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G15680 0.5kb upstream 0.5kb upstream 1147 true Chr2: 6830495-6831641 Arabidopsis thaliana
AT2G15680 0.5kb upstream 0.5kb upstream 500 false Chr2: 6830495-6830994 Arabidopsis thaliana
AT2G15680 0.5kb downstream 0.5kb downstream 1147 true Chr2: 6830995-6832141 Arabidopsis thaliana
AT2G15680 0.5kb downstream 0.5kb downstream 500 false Chr2: 6831642-6832141 Arabidopsis thaliana
AT2G15680 1.0kb upstream 1.0kb upstream 1647 true Chr2: 6829995-6831641 Arabidopsis thaliana
AT2G15680 1.0kb upstream 1.0kb upstream 1000 false Chr2: 6829995-6830994 Arabidopsis thaliana
AT2G15680 1.0kb downstream 1.0kb downstream 1647 true Chr2: 6830995-6832641 Arabidopsis thaliana
AT2G15680 1.0kb downstream 1.0kb downstream 1000 false Chr2: 6831642-6832641 Arabidopsis thaliana
AT2G15680 2.0kb upstream 2.0kb upstream 2647 true Chr2: 6828995-6831641 Arabidopsis thaliana
AT2G15680 2.0kb upstream 2.0kb upstream 2000 false Chr2: 6828995-6830994 Arabidopsis thaliana
AT2G15680 2.0kb downstream 2.0kb downstream 2647 true Chr2: 6830995-6833641 Arabidopsis thaliana
AT2G15680 2.0kb downstream 2.0kb downstream 2000 false Chr2: 6831642-6833641 Arabidopsis thaliana
AT2G15680 5.0kb upstream 5.0kb upstream 5647 true Chr2: 6825995-6831641 Arabidopsis thaliana
AT2G15680 5.0kb upstream 5.0kb upstream 5000 false Chr2: 6825995-6830994 Arabidopsis thaliana
AT2G15680 5.0kb downstream 5.0kb downstream 5647 true Chr2: 6830995-6836641 Arabidopsis thaliana
AT2G15680 5.0kb downstream 5.0kb downstream 5000 false Chr2: 6831642-6836641 Arabidopsis thaliana
AT2G15680 10.0kb upstream 10.0kb upstream 10647 true Chr2: 6820995-6831641 Arabidopsis thaliana
AT2G15680 10.0kb upstream 10.0kb upstream 10000 false Chr2: 6820995-6830994 Arabidopsis thaliana
AT2G15680 10.0kb downstream 10.0kb downstream 10647 true Chr2: 6830995-6841641 Arabidopsis thaliana
AT2G15680 10.0kb downstream 10.0kb downstream 10000 false Chr2: 6831642-6841641 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369412 5261 Brassicaceae View MSA
123836714 5264 Brassicales-Malvales View MSA
124349176 5266 SBM View MSA
124254237 5268 Malvidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.99       High
cufflinks 5.824        
cufflinks 8.348        
cufflinks 3.781       Low
cufflinks 6.659        
cufflinks 5.085        

0 Strain