Gene : LCR68 A. thaliana TAIR10
Primary Identifier:  ? AT2G02130 Defline:  (1 of 19) PF00304 - Gamma-thionin family (Gamma-thionin)
Genomic Order:  120 Name:  ? AT2G02130
Secondary Identifier:  ? PAC:19643419
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G02130 0.5kb upstream 0.5kb upstream 1136 true Chr2: 539499-540634 Arabidopsis thaliana
AT2G02130 0.5kb upstream 0.5kb upstream 500 false Chr2: 539499-539998 Arabidopsis thaliana
AT2G02130 0.5kb downstream 0.5kb downstream 1136 true Chr2: 539999-541134 Arabidopsis thaliana
AT2G02130 0.5kb downstream 0.5kb downstream 500 false Chr2: 540635-541134 Arabidopsis thaliana
AT2G02130 1.0kb upstream 1.0kb upstream 1636 true Chr2: 538999-540634 Arabidopsis thaliana
AT2G02130 1.0kb upstream 1.0kb upstream 1000 false Chr2: 538999-539998 Arabidopsis thaliana
AT2G02130 1.0kb downstream 1.0kb downstream 1636 true Chr2: 539999-541634 Arabidopsis thaliana
AT2G02130 1.0kb downstream 1.0kb downstream 1000 false Chr2: 540635-541634 Arabidopsis thaliana
AT2G02130 2.0kb upstream 2.0kb upstream 2636 true Chr2: 537999-540634 Arabidopsis thaliana
AT2G02130 2.0kb upstream 2.0kb upstream 2000 false Chr2: 537999-539998 Arabidopsis thaliana
AT2G02130 2.0kb downstream 2.0kb downstream 2636 true Chr2: 539999-542634 Arabidopsis thaliana
AT2G02130 2.0kb downstream 2.0kb downstream 2000 false Chr2: 540635-542634 Arabidopsis thaliana
AT2G02130 5.0kb upstream 5.0kb upstream 5636 true Chr2: 534999-540634 Arabidopsis thaliana
AT2G02130 5.0kb upstream 5.0kb upstream 5000 false Chr2: 534999-539998 Arabidopsis thaliana
AT2G02130 5.0kb downstream 5.0kb downstream 5636 true Chr2: 539999-545634 Arabidopsis thaliana
AT2G02130 5.0kb downstream 5.0kb downstream 5000 false Chr2: 540635-545634 Arabidopsis thaliana
AT2G02130 10.0kb upstream 10.0kb upstream 10636 true Chr2: 529999-540634 Arabidopsis thaliana
AT2G02130 10.0kb upstream 10.0kb upstream 10000 false Chr2: 529999-539998 Arabidopsis thaliana
AT2G02130 10.0kb downstream 10.0kb downstream 10636 true Chr2: 539999-550634 Arabidopsis thaliana
AT2G02130 10.0kb downstream 10.0kb downstream 10000 false Chr2: 540635-550634 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029096 5273 Angiosperm View MSA
122381700 5261 Brassicaceae View MSA
123839265 5264 Brassicales-Malvales View MSA
124344751 5266 SBM View MSA
124245250 5268 Malvidae View MSA
124066423 5270 Rosid View MSA
123752741 5271 Pentapetalae View MSA
122796765 5272 Eudicot View MSA
121298492 5274 Embryophyte View MSA
123336463 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 108.293     High High
cufflinks 50.616     High  
cufflinks 95.118     High High
cufflinks 48.178     High  
cufflinks 59.491     High  
cufflinks 60.452     High  

0 Strain