Gene : PDF2.1 A. thaliana TAIR10
Primary Identifier:  ? AT2G02120 Defline:  (1 of 19) PF00304 - Gamma-thionin family (Gamma-thionin)
Genomic Order:  119 Name:  ? AT2G02120
Secondary Identifier:  ? PAC:19638725
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G02120 0.5kb upstream 0.5kb upstream 1306 true Chr2: 537750-539055 Arabidopsis thaliana
AT2G02120 0.5kb upstream 0.5kb upstream 500 false Chr2: 537750-538249 Arabidopsis thaliana
AT2G02120 0.5kb downstream 0.5kb downstream 1306 true Chr2: 538250-539555 Arabidopsis thaliana
AT2G02120 0.5kb downstream 0.5kb downstream 500 false Chr2: 539056-539555 Arabidopsis thaliana
AT2G02120 1.0kb upstream 1.0kb upstream 1806 true Chr2: 537250-539055 Arabidopsis thaliana
AT2G02120 1.0kb upstream 1.0kb upstream 1000 false Chr2: 537250-538249 Arabidopsis thaliana
AT2G02120 1.0kb downstream 1.0kb downstream 1806 true Chr2: 538250-540055 Arabidopsis thaliana
AT2G02120 1.0kb downstream 1.0kb downstream 1000 false Chr2: 539056-540055 Arabidopsis thaliana
AT2G02120 2.0kb upstream 2.0kb upstream 2806 true Chr2: 536250-539055 Arabidopsis thaliana
AT2G02120 2.0kb upstream 2.0kb upstream 2000 false Chr2: 536250-538249 Arabidopsis thaliana
AT2G02120 2.0kb downstream 2.0kb downstream 2806 true Chr2: 538250-541055 Arabidopsis thaliana
AT2G02120 2.0kb downstream 2.0kb downstream 2000 false Chr2: 539056-541055 Arabidopsis thaliana
AT2G02120 5.0kb upstream 5.0kb upstream 5806 true Chr2: 533250-539055 Arabidopsis thaliana
AT2G02120 5.0kb upstream 5.0kb upstream 5000 false Chr2: 533250-538249 Arabidopsis thaliana
AT2G02120 5.0kb downstream 5.0kb downstream 5806 true Chr2: 538250-544055 Arabidopsis thaliana
AT2G02120 5.0kb downstream 5.0kb downstream 5000 false Chr2: 539056-544055 Arabidopsis thaliana
AT2G02120 10.0kb upstream 10.0kb upstream 10806 true Chr2: 528250-539055 Arabidopsis thaliana
AT2G02120 10.0kb upstream 10.0kb upstream 10000 false Chr2: 528250-538249 Arabidopsis thaliana
AT2G02120 10.0kb downstream 10.0kb downstream 10806 true Chr2: 538250-549055 Arabidopsis thaliana
AT2G02120 10.0kb downstream 10.0kb downstream 10000 false Chr2: 539056-549055 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029096 5273 Angiosperm View MSA
122381700 5261 Brassicaceae View MSA
123839265 5264 Brassicales-Malvales View MSA
124344751 5266 SBM View MSA
124245250 5268 Malvidae View MSA
124066423 5270 Rosid View MSA
123752741 5271 Pentapetalae View MSA
122796765 5272 Eudicot View MSA
121298492 5274 Embryophyte View MSA
123336463 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.196     Low Low
cufflinks 121.953     High High
cufflinks 0.896        
cufflinks 172.883     High High
cufflinks 2.184        
cufflinks 22.492        

0 Strain