Gene : AT2G39390 A. thaliana TAIR10
Defline:  (1 of 4) K02918 - large subunit ribosomal protein L35e (RP-L35e, RPL35) Genomic Order:  3304
Name:  ? AT2G39390 Secondary Identifier:  ? PAC:19638703
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G39390 0.5kb upstream 0.5kb upstream 1719 true Chr2: 16450660-16452378 Arabidopsis thaliana
AT2G39390 0.5kb upstream 0.5kb upstream 500 false Chr2: 16451879-16452378 Arabidopsis thaliana
AT2G39390 0.5kb downstream 0.5kb downstream 1719 true Chr2: 16450160-16451878 Arabidopsis thaliana
AT2G39390 0.5kb downstream 0.5kb downstream 500 false Chr2: 16450160-16450659 Arabidopsis thaliana
AT2G39390 1.0kb upstream 1.0kb upstream 2219 true Chr2: 16450660-16452878 Arabidopsis thaliana
AT2G39390 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16451879-16452878 Arabidopsis thaliana
AT2G39390 1.0kb downstream 1.0kb downstream 2219 true Chr2: 16449660-16451878 Arabidopsis thaliana
AT2G39390 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16449660-16450659 Arabidopsis thaliana
AT2G39390 2.0kb upstream 2.0kb upstream 3219 true Chr2: 16450660-16453878 Arabidopsis thaliana
AT2G39390 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16451879-16453878 Arabidopsis thaliana
AT2G39390 2.0kb downstream 2.0kb downstream 3219 true Chr2: 16448660-16451878 Arabidopsis thaliana
AT2G39390 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16448660-16450659 Arabidopsis thaliana
AT2G39390 5.0kb upstream 5.0kb upstream 6219 true Chr2: 16450660-16456878 Arabidopsis thaliana
AT2G39390 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16451879-16456878 Arabidopsis thaliana
AT2G39390 5.0kb downstream 5.0kb downstream 6219 true Chr2: 16445660-16451878 Arabidopsis thaliana
AT2G39390 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16445660-16450659 Arabidopsis thaliana
AT2G39390 10.0kb upstream 10.0kb upstream 11219 true Chr2: 16450660-16461878 Arabidopsis thaliana
AT2G39390 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16451879-16461878 Arabidopsis thaliana
AT2G39390 10.0kb downstream 10.0kb downstream 11219 true Chr2: 16440660-16451878 Arabidopsis thaliana
AT2G39390 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16440660-16450659 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381489 5261 Brassicaceae View MSA
123838883 5264 Brassicales-Malvales View MSA
124346540 5266 SBM View MSA
124251991 5268 Malvidae View MSA
124074061 5270 Rosid View MSA
123744654 5271 Pentapetalae View MSA
122786708 5272 Eudicot View MSA
122050445 5273 Angiosperm View MSA
121345704 5274 Embryophyte View MSA
123426654 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.186     High  
cufflinks 60.566     High  
cufflinks 43.894     High  
cufflinks 63.766     High  
cufflinks 31.544     High Low
cufflinks 73.328     High High

0 Strain