Gene : AT2G39360 A. thaliana TAIR10
Defline:  (1 of 16) PF07714//PF11721 - Protein tyrosine kinase (Pkinase_Tyr) // Di-glucose binding within endoplasmic reticulum (Malectin) Genomic Order:  3301
Name:  ? AT2G39360 Secondary Identifier:  ? PAC:19640590
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G39360 0.5kb upstream 0.5kb upstream 3183 true Chr2: 16437472-16440654 Arabidopsis thaliana
AT2G39360 0.5kb upstream 0.5kb upstream 500 false Chr2: 16440155-16440654 Arabidopsis thaliana
AT2G39360 0.5kb downstream 0.5kb downstream 3183 true Chr2: 16436972-16440154 Arabidopsis thaliana
AT2G39360 0.5kb downstream 0.5kb downstream 500 false Chr2: 16436972-16437471 Arabidopsis thaliana
AT2G39360 1.0kb upstream 1.0kb upstream 3683 true Chr2: 16437472-16441154 Arabidopsis thaliana
AT2G39360 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16440155-16441154 Arabidopsis thaliana
AT2G39360 1.0kb downstream 1.0kb downstream 3683 true Chr2: 16436472-16440154 Arabidopsis thaliana
AT2G39360 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16436472-16437471 Arabidopsis thaliana
AT2G39360 2.0kb upstream 2.0kb upstream 4683 true Chr2: 16437472-16442154 Arabidopsis thaliana
AT2G39360 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16440155-16442154 Arabidopsis thaliana
AT2G39360 2.0kb downstream 2.0kb downstream 4683 true Chr2: 16435472-16440154 Arabidopsis thaliana
AT2G39360 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16435472-16437471 Arabidopsis thaliana
AT2G39360 5.0kb upstream 5.0kb upstream 7683 true Chr2: 16437472-16445154 Arabidopsis thaliana
AT2G39360 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16440155-16445154 Arabidopsis thaliana
AT2G39360 5.0kb downstream 5.0kb downstream 7683 true Chr2: 16432472-16440154 Arabidopsis thaliana
AT2G39360 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16432472-16437471 Arabidopsis thaliana
AT2G39360 10.0kb upstream 10.0kb upstream 12683 true Chr2: 16437472-16450154 Arabidopsis thaliana
AT2G39360 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16440155-16450154 Arabidopsis thaliana
AT2G39360 10.0kb downstream 10.0kb downstream 12683 true Chr2: 16427472-16440154 Arabidopsis thaliana
AT2G39360 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16427472-16437471 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381646 5261 Brassicaceae View MSA
123838548 5264 Brassicales-Malvales View MSA
124349469 5266 SBM View MSA
124246443 5268 Malvidae View MSA
124074134 5270 Rosid View MSA
123748316 5271 Pentapetalae View MSA
122789518 5272 Eudicot View MSA
122044350 5273 Angiosperm View MSA
121310282 5274 Embryophyte View MSA
123347811 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.896       High
cufflinks 3.491       Low
cufflinks 11.424        
cufflinks 4.026        
cufflinks 11.051        
cufflinks 4.84        

0 Strain