Gene : AT2G36480 A. thaliana TAIR10
Defline:  (1 of 4) K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Genomic Order:  2997
Name:  ? AT2G36480 Secondary Identifier:  ? PAC:19639320
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G36480 0.5kb upstream 0.5kb upstream 4208 true Chr2: 15302567-15306774 Arabidopsis thaliana
AT2G36480 0.5kb upstream 0.5kb upstream 500 false Chr2: 15306275-15306774 Arabidopsis thaliana
AT2G36480 0.5kb downstream 0.5kb downstream 4208 true Chr2: 15302067-15306274 Arabidopsis thaliana
AT2G36480 0.5kb downstream 0.5kb downstream 500 false Chr2: 15302067-15302566 Arabidopsis thaliana
AT2G36480 1.0kb upstream 1.0kb upstream 4708 true Chr2: 15302567-15307274 Arabidopsis thaliana
AT2G36480 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15306275-15307274 Arabidopsis thaliana
AT2G36480 1.0kb downstream 1.0kb downstream 4708 true Chr2: 15301567-15306274 Arabidopsis thaliana
AT2G36480 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15301567-15302566 Arabidopsis thaliana
AT2G36480 2.0kb upstream 2.0kb upstream 5708 true Chr2: 15302567-15308274 Arabidopsis thaliana
AT2G36480 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15306275-15308274 Arabidopsis thaliana
AT2G36480 2.0kb downstream 2.0kb downstream 5708 true Chr2: 15300567-15306274 Arabidopsis thaliana
AT2G36480 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15300567-15302566 Arabidopsis thaliana
AT2G36480 5.0kb upstream 5.0kb upstream 8708 true Chr2: 15302567-15311274 Arabidopsis thaliana
AT2G36480 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15306275-15311274 Arabidopsis thaliana
AT2G36480 5.0kb downstream 5.0kb downstream 8708 true Chr2: 15297567-15306274 Arabidopsis thaliana
AT2G36480 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15297567-15302566 Arabidopsis thaliana
AT2G36480 10.0kb upstream 10.0kb upstream 13708 true Chr2: 15302567-15316274 Arabidopsis thaliana
AT2G36480 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15306275-15316274 Arabidopsis thaliana
AT2G36480 10.0kb downstream 10.0kb downstream 13708 true Chr2: 15292567-15306274 Arabidopsis thaliana
AT2G36480 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15292567-15302566 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370108 5261 Brassicaceae View MSA
123828666 5264 Brassicales-Malvales View MSA
124336456 5266 SBM View MSA
124250997 5268 Malvidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.963        
cufflinks 2.749        
cufflinks 1.739       Low
cufflinks 2.963        
cufflinks 1.706       Low
cufflinks 3.068       High

0 Strain