Gene : AT2G05120 A. thaliana TAIR10
Defline:  (1 of 1) K14300 - nuclear pore complex protein Nup133 (NUP133) Genomic Order:  388
Name:  ? AT2G05120 Secondary Identifier:  ? PAC:19642042
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G05120 0.5kb upstream 0.5kb upstream 5526 true Chr2: 1841887-1847412 Arabidopsis thaliana
AT2G05120 0.5kb upstream 0.5kb upstream 500 false Chr2: 1846913-1847412 Arabidopsis thaliana
AT2G05120 0.5kb downstream 0.5kb downstream 5526 true Chr2: 1841387-1846912 Arabidopsis thaliana
AT2G05120 0.5kb downstream 0.5kb downstream 500 false Chr2: 1841387-1841886 Arabidopsis thaliana
AT2G05120 1.0kb upstream 1.0kb upstream 6026 true Chr2: 1841887-1847912 Arabidopsis thaliana
AT2G05120 1.0kb upstream 1.0kb upstream 1000 false Chr2: 1846913-1847912 Arabidopsis thaliana
AT2G05120 1.0kb downstream 1.0kb downstream 6026 true Chr2: 1840887-1846912 Arabidopsis thaliana
AT2G05120 1.0kb downstream 1.0kb downstream 1000 false Chr2: 1840887-1841886 Arabidopsis thaliana
AT2G05120 2.0kb upstream 2.0kb upstream 7026 true Chr2: 1841887-1848912 Arabidopsis thaliana
AT2G05120 2.0kb upstream 2.0kb upstream 2000 false Chr2: 1846913-1848912 Arabidopsis thaliana
AT2G05120 2.0kb downstream 2.0kb downstream 7026 true Chr2: 1839887-1846912 Arabidopsis thaliana
AT2G05120 2.0kb downstream 2.0kb downstream 2000 false Chr2: 1839887-1841886 Arabidopsis thaliana
AT2G05120 5.0kb upstream 5.0kb upstream 10026 true Chr2: 1841887-1851912 Arabidopsis thaliana
AT2G05120 5.0kb upstream 5.0kb upstream 5000 false Chr2: 1846913-1851912 Arabidopsis thaliana
AT2G05120 5.0kb downstream 5.0kb downstream 10026 true Chr2: 1836887-1846912 Arabidopsis thaliana
AT2G05120 5.0kb downstream 5.0kb downstream 5000 false Chr2: 1836887-1841886 Arabidopsis thaliana
AT2G05120 10.0kb upstream 10.0kb upstream 15026 true Chr2: 1841887-1856912 Arabidopsis thaliana
AT2G05120 10.0kb upstream 10.0kb upstream 10000 false Chr2: 1846913-1856912 Arabidopsis thaliana
AT2G05120 10.0kb downstream 10.0kb downstream 15026 true Chr2: 1831887-1846912 Arabidopsis thaliana
AT2G05120 10.0kb downstream 10.0kb downstream 10000 false Chr2: 1831887-1841886 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372288 5261 Brassicaceae View MSA
123830399 5264 Brassicales-Malvales View MSA
124343300 5266 SBM View MSA
124240914 5268 Malvidae View MSA
124065950 5270 Rosid View MSA
123739362 5271 Pentapetalae View MSA
122792648 5272 Eudicot View MSA
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.076        
cufflinks 3.474        
cufflinks 1.75        
cufflinks 3.584        
cufflinks 1.372       Low
cufflinks 3.872       High

0 Strain