Gene : AT2G01690 A. thaliana TAIR10
Defline:  (1 of 1) K15305 - vacuole morphology and inheritance protein 14 (VAC14, TAX1BP2) Genomic Order:  69
Name:  ? AT2G01690 Secondary Identifier:  ? PAC:19639358
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01690 0.5kb upstream 0.5kb upstream 5604 true Chr2: 308702-314305 Arabidopsis thaliana
AT2G01690 0.5kb upstream 0.5kb upstream 500 false Chr2: 313806-314305 Arabidopsis thaliana
AT2G01690 0.5kb downstream 0.5kb downstream 5604 true Chr2: 308202-313805 Arabidopsis thaliana
AT2G01690 0.5kb downstream 0.5kb downstream 500 false Chr2: 308202-308701 Arabidopsis thaliana
AT2G01690 1.0kb upstream 1.0kb upstream 6104 true Chr2: 308702-314805 Arabidopsis thaliana
AT2G01690 1.0kb upstream 1.0kb upstream 1000 false Chr2: 313806-314805 Arabidopsis thaliana
AT2G01690 1.0kb downstream 1.0kb downstream 6104 true Chr2: 307702-313805 Arabidopsis thaliana
AT2G01690 1.0kb downstream 1.0kb downstream 1000 false Chr2: 307702-308701 Arabidopsis thaliana
AT2G01690 2.0kb upstream 2.0kb upstream 7104 true Chr2: 308702-315805 Arabidopsis thaliana
AT2G01690 2.0kb upstream 2.0kb upstream 2000 false Chr2: 313806-315805 Arabidopsis thaliana
AT2G01690 2.0kb downstream 2.0kb downstream 7104 true Chr2: 306702-313805 Arabidopsis thaliana
AT2G01690 2.0kb downstream 2.0kb downstream 2000 false Chr2: 306702-308701 Arabidopsis thaliana
AT2G01690 5.0kb upstream 5.0kb upstream 10104 true Chr2: 308702-318805 Arabidopsis thaliana
AT2G01690 5.0kb upstream 5.0kb upstream 5000 false Chr2: 313806-318805 Arabidopsis thaliana
AT2G01690 5.0kb downstream 5.0kb downstream 10104 true Chr2: 303702-313805 Arabidopsis thaliana
AT2G01690 5.0kb downstream 5.0kb downstream 5000 false Chr2: 303702-308701 Arabidopsis thaliana
AT2G01690 10.0kb upstream 10.0kb upstream 15104 true Chr2: 308702-323805 Arabidopsis thaliana
AT2G01690 10.0kb upstream 10.0kb upstream 10000 false Chr2: 313806-323805 Arabidopsis thaliana
AT2G01690 10.0kb downstream 10.0kb downstream 15104 true Chr2: 298702-313805 Arabidopsis thaliana
AT2G01690 10.0kb downstream 10.0kb downstream 10000 false Chr2: 298702-308701 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372474 5261 Brassicaceae View MSA
123835055 5264 Brassicales-Malvales View MSA
124337404 5266 SBM View MSA
124243465 5268 Malvidae View MSA
124065694 5270 Rosid View MSA
123742158 5271 Pentapetalae View MSA
122787400 5272 Eudicot View MSA
122047421 5273 Angiosperm View MSA
121346915 5274 Embryophyte View MSA
123428205 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.075        
cufflinks 7.674        
cufflinks 5.789       Low
cufflinks 8.375       High
cufflinks 6.131        
cufflinks 7.949        

0 Strain