Gene : RGA1 A. thaliana TAIR10
Primary Identifier:  ? AT2G01570 Defline:  (1 of 2) PTHR31636//PTHR31636:SF50 - FAMILY NOT NAMED // DELLA PROTEIN GAI-RELATED
Genomic Order:  56 Name:  ? AT2G01570
Secondary Identifier:  ? PAC:19639028
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01570 0.5kb upstream 0.5kb upstream 2802 true Chr2: 255249-258050 Arabidopsis thaliana
AT2G01570 0.5kb upstream 0.5kb upstream 500 false Chr2: 257551-258050 Arabidopsis thaliana
AT2G01570 0.5kb downstream 0.5kb downstream 2802 true Chr2: 254749-257550 Arabidopsis thaliana
AT2G01570 0.5kb downstream 0.5kb downstream 500 false Chr2: 254749-255248 Arabidopsis thaliana
AT2G01570 1.0kb upstream 1.0kb upstream 3302 true Chr2: 255249-258550 Arabidopsis thaliana
AT2G01570 1.0kb upstream 1.0kb upstream 1000 false Chr2: 257551-258550 Arabidopsis thaliana
AT2G01570 1.0kb downstream 1.0kb downstream 3302 true Chr2: 254249-257550 Arabidopsis thaliana
AT2G01570 1.0kb downstream 1.0kb downstream 1000 false Chr2: 254249-255248 Arabidopsis thaliana
AT2G01570 2.0kb upstream 2.0kb upstream 4302 true Chr2: 255249-259550 Arabidopsis thaliana
AT2G01570 2.0kb upstream 2.0kb upstream 2000 false Chr2: 257551-259550 Arabidopsis thaliana
AT2G01570 2.0kb downstream 2.0kb downstream 4302 true Chr2: 253249-257550 Arabidopsis thaliana
AT2G01570 2.0kb downstream 2.0kb downstream 2000 false Chr2: 253249-255248 Arabidopsis thaliana
AT2G01570 5.0kb upstream 5.0kb upstream 7302 true Chr2: 255249-262550 Arabidopsis thaliana
AT2G01570 5.0kb upstream 5.0kb upstream 5000 false Chr2: 257551-262550 Arabidopsis thaliana
AT2G01570 5.0kb downstream 5.0kb downstream 7302 true Chr2: 250249-257550 Arabidopsis thaliana
AT2G01570 5.0kb downstream 5.0kb downstream 5000 false Chr2: 250249-255248 Arabidopsis thaliana
AT2G01570 10.0kb upstream 10.0kb upstream 12302 true Chr2: 255249-267550 Arabidopsis thaliana
AT2G01570 10.0kb upstream 10.0kb upstream 10000 false Chr2: 257551-267550 Arabidopsis thaliana
AT2G01570 10.0kb downstream 10.0kb downstream 12302 true Chr2: 245249-257550 Arabidopsis thaliana
AT2G01570 10.0kb downstream 10.0kb downstream 10000 false Chr2: 245249-255248 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368430 5261 Brassicaceae View MSA
123841013 5264 Brassicales-Malvales View MSA
124341098 5266 SBM View MSA
124247494 5268 Malvidae View MSA
124070083 5270 Rosid View MSA
123746513 5271 Pentapetalae View MSA
122796681 5272 Eudicot View MSA
122044707 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.509       Low
cufflinks 39.989     High  
cufflinks 35.711     High  
cufflinks 42.842     High High
cufflinks 33.159     High  
cufflinks 40.721     High  

0 Strain