Gene : ZFP1 A. thaliana TAIR10
Primary Identifier:  ? AT1G80730 Defline:  zinc-finger protein 1
Genomic Order:  7050 Name:  ? AT1G80730
Secondary Identifier:  ? PAC:19651123
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G80730 0.5kb upstream 0.5kb upstream 1425 true Chr1: 30339323-30340747 Arabidopsis thaliana
AT1G80730 0.5kb upstream 0.5kb upstream 500 false Chr1: 30340248-30340747 Arabidopsis thaliana
AT1G80730 0.5kb downstream 0.5kb downstream 1425 true Chr1: 30338823-30340247 Arabidopsis thaliana
AT1G80730 0.5kb downstream 0.5kb downstream 500 false Chr1: 30338823-30339322 Arabidopsis thaliana
AT1G80730 1.0kb upstream 1.0kb upstream 1925 true Chr1: 30339323-30341247 Arabidopsis thaliana
AT1G80730 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30340248-30341247 Arabidopsis thaliana
AT1G80730 1.0kb downstream 1.0kb downstream 1925 true Chr1: 30338323-30340247 Arabidopsis thaliana
AT1G80730 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30338323-30339322 Arabidopsis thaliana
AT1G80730 2.0kb upstream 2.0kb upstream 2925 true Chr1: 30339323-30342247 Arabidopsis thaliana
AT1G80730 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30340248-30342247 Arabidopsis thaliana
AT1G80730 2.0kb downstream 2.0kb downstream 2925 true Chr1: 30337323-30340247 Arabidopsis thaliana
AT1G80730 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30337323-30339322 Arabidopsis thaliana
AT1G80730 5.0kb upstream 5.0kb upstream 5925 true Chr1: 30339323-30345247 Arabidopsis thaliana
AT1G80730 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30340248-30345247 Arabidopsis thaliana
AT1G80730 5.0kb downstream 5.0kb downstream 5925 true Chr1: 30334323-30340247 Arabidopsis thaliana
AT1G80730 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30334323-30339322 Arabidopsis thaliana
AT1G80730 10.0kb upstream 10.0kb upstream 10925 true Chr1: 30339323-30350247 Arabidopsis thaliana
AT1G80730 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30340248-30350247 Arabidopsis thaliana
AT1G80730 10.0kb downstream 10.0kb downstream 10925 true Chr1: 30329323-30340247 Arabidopsis thaliana
AT1G80730 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30329323-30339322 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377904 5261 Brassicaceae View MSA
123838415 5264 Brassicales-Malvales View MSA
124346705 5266 SBM View MSA
124253974 5268 Malvidae View MSA
124070347 5270 Rosid View MSA
123745307 5271 Pentapetalae View MSA
122786799 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.187     Low  
cufflinks 7.652        
cufflinks 0.059     Low Low
cufflinks 6.344        
cufflinks 0.106     Low  
cufflinks 10.808       High

0 Strain