Gene : AT1G80670 A. thaliana TAIR10
Defline:  (1 of 2) K14298 - mRNA export factor (RAE1, GLE2) Genomic Order:  7044
Name:  ? AT1G80670 Secondary Identifier:  ? PAC:19652967
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G80670 0.5kb upstream 0.5kb upstream 3705 true Chr1: 30320576-30324280 Arabidopsis thaliana
AT1G80670 0.5kb upstream 0.5kb upstream 500 false Chr1: 30323781-30324280 Arabidopsis thaliana
AT1G80670 0.5kb downstream 0.5kb downstream 3705 true Chr1: 30320076-30323780 Arabidopsis thaliana
AT1G80670 0.5kb downstream 0.5kb downstream 500 false Chr1: 30320076-30320575 Arabidopsis thaliana
AT1G80670 1.0kb upstream 1.0kb upstream 4205 true Chr1: 30320576-30324780 Arabidopsis thaliana
AT1G80670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30323781-30324780 Arabidopsis thaliana
AT1G80670 1.0kb downstream 1.0kb downstream 4205 true Chr1: 30319576-30323780 Arabidopsis thaliana
AT1G80670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30319576-30320575 Arabidopsis thaliana
AT1G80670 2.0kb upstream 2.0kb upstream 5205 true Chr1: 30320576-30325780 Arabidopsis thaliana
AT1G80670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30323781-30325780 Arabidopsis thaliana
AT1G80670 2.0kb downstream 2.0kb downstream 5205 true Chr1: 30318576-30323780 Arabidopsis thaliana
AT1G80670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30318576-30320575 Arabidopsis thaliana
AT1G80670 5.0kb upstream 5.0kb upstream 8205 true Chr1: 30320576-30328780 Arabidopsis thaliana
AT1G80670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30323781-30328780 Arabidopsis thaliana
AT1G80670 5.0kb downstream 5.0kb downstream 8205 true Chr1: 30315576-30323780 Arabidopsis thaliana
AT1G80670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30315576-30320575 Arabidopsis thaliana
AT1G80670 10.0kb upstream 10.0kb upstream 13205 true Chr1: 30320576-30333780 Arabidopsis thaliana
AT1G80670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30323781-30333780 Arabidopsis thaliana
AT1G80670 10.0kb downstream 10.0kb downstream 13205 true Chr1: 30310576-30323780 Arabidopsis thaliana
AT1G80670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30310576-30320575 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373512 5261 Brassicaceae View MSA
123839546 5264 Brassicales-Malvales View MSA
124337854 5266 SBM View MSA
124238101 5268 Malvidae View MSA
124073697 5270 Rosid View MSA
123740132 5271 Pentapetalae View MSA
122786172 5272 Eudicot View MSA
122042372 5273 Angiosperm View MSA
121348493 5274 Embryophyte View MSA
123423920 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.622        
cufflinks 7.845        
cufflinks 6.462       Low
cufflinks 8.985        
cufflinks 6.553       Low
cufflinks 9.177        

0 Strain