Gene : CYCA2;4 A. thaliana TAIR10
Primary Identifier:  ? AT1G80370 Defline:  (1 of 2) PTHR10177//PTHR10177:SF239 - CYCLINE // CYCLIN-A2-3-RELATED
Genomic Order:  7014 Name:  ? AT1G80370
Secondary Identifier:  ? PAC:19654766
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G80370 0.5kb upstream 0.5kb upstream 3657 true Chr1: 30213205-30216861 Arabidopsis thaliana
AT1G80370 0.5kb upstream 0.5kb upstream 500 false Chr1: 30213205-30213704 Arabidopsis thaliana
AT1G80370 0.5kb downstream 0.5kb downstream 3657 true Chr1: 30213705-30217361 Arabidopsis thaliana
AT1G80370 0.5kb downstream 0.5kb downstream 500 false Chr1: 30216862-30217361 Arabidopsis thaliana
AT1G80370 1.0kb upstream 1.0kb upstream 4157 true Chr1: 30212705-30216861 Arabidopsis thaliana
AT1G80370 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30212705-30213704 Arabidopsis thaliana
AT1G80370 1.0kb downstream 1.0kb downstream 4157 true Chr1: 30213705-30217861 Arabidopsis thaliana
AT1G80370 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30216862-30217861 Arabidopsis thaliana
AT1G80370 2.0kb upstream 2.0kb upstream 5157 true Chr1: 30211705-30216861 Arabidopsis thaliana
AT1G80370 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30211705-30213704 Arabidopsis thaliana
AT1G80370 2.0kb downstream 2.0kb downstream 5157 true Chr1: 30213705-30218861 Arabidopsis thaliana
AT1G80370 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30216862-30218861 Arabidopsis thaliana
AT1G80370 5.0kb upstream 5.0kb upstream 8157 true Chr1: 30208705-30216861 Arabidopsis thaliana
AT1G80370 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30208705-30213704 Arabidopsis thaliana
AT1G80370 5.0kb downstream 5.0kb downstream 8157 true Chr1: 30213705-30221861 Arabidopsis thaliana
AT1G80370 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30216862-30221861 Arabidopsis thaliana
AT1G80370 10.0kb upstream 10.0kb upstream 13157 true Chr1: 30203705-30216861 Arabidopsis thaliana
AT1G80370 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30203705-30213704 Arabidopsis thaliana
AT1G80370 10.0kb downstream 10.0kb downstream 13157 true Chr1: 30213705-30226861 Arabidopsis thaliana
AT1G80370 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30216862-30226861 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366520 5261 Brassicaceae View MSA
123830567 5264 Brassicales-Malvales View MSA
124342812 5266 SBM View MSA
124251385 5268 Malvidae View MSA
124065814 5270 Rosid View MSA
123746110 5271 Pentapetalae View MSA
122796244 5272 Eudicot View MSA
122045619 5273 Angiosperm View MSA
123429011 5275 Viridiplantae View MSA
121349586 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.555        
cufflinks 3.496        
cufflinks 0.831        
cufflinks 4.578       High
cufflinks 0.639       Low
cufflinks 4.104        

0 Strain