Gene : AT1G63850 A. thaliana TAIR10
Defline:  BTB/POZ domain-containing protein Genomic Order:  5301
Name:  ? AT1G63850 Secondary Identifier:  ? PAC:19650730
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G63850 0.5kb upstream 0.5kb upstream 2247 true Chr1: 23696462-23698708 Arabidopsis thaliana
AT1G63850 0.5kb upstream 0.5kb upstream 500 false Chr1: 23696462-23696961 Arabidopsis thaliana
AT1G63850 0.5kb downstream 0.5kb downstream 2247 true Chr1: 23696962-23699208 Arabidopsis thaliana
AT1G63850 0.5kb downstream 0.5kb downstream 500 false Chr1: 23698709-23699208 Arabidopsis thaliana
AT1G63850 1.0kb upstream 1.0kb upstream 2747 true Chr1: 23695962-23698708 Arabidopsis thaliana
AT1G63850 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23695962-23696961 Arabidopsis thaliana
AT1G63850 1.0kb downstream 1.0kb downstream 2747 true Chr1: 23696962-23699708 Arabidopsis thaliana
AT1G63850 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23698709-23699708 Arabidopsis thaliana
AT1G63850 2.0kb upstream 2.0kb upstream 3747 true Chr1: 23694962-23698708 Arabidopsis thaliana
AT1G63850 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23694962-23696961 Arabidopsis thaliana
AT1G63850 2.0kb downstream 2.0kb downstream 3747 true Chr1: 23696962-23700708 Arabidopsis thaliana
AT1G63850 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23698709-23700708 Arabidopsis thaliana
AT1G63850 5.0kb upstream 5.0kb upstream 6747 true Chr1: 23691962-23698708 Arabidopsis thaliana
AT1G63850 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23691962-23696961 Arabidopsis thaliana
AT1G63850 5.0kb downstream 5.0kb downstream 6747 true Chr1: 23696962-23703708 Arabidopsis thaliana
AT1G63850 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23698709-23703708 Arabidopsis thaliana
AT1G63850 10.0kb upstream 10.0kb upstream 11747 true Chr1: 23686962-23698708 Arabidopsis thaliana
AT1G63850 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23686962-23696961 Arabidopsis thaliana
AT1G63850 10.0kb downstream 10.0kb downstream 11747 true Chr1: 23696962-23708708 Arabidopsis thaliana
AT1G63850 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23698709-23708708 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369937 5261 Brassicaceae View MSA
123828255 5264 Brassicales-Malvales View MSA
124343726 5266 SBM View MSA
124252919 5268 Malvidae View MSA
124067968 5270 Rosid View MSA
123740485 5271 Pentapetalae View MSA
122788720 5272 Eudicot View MSA
122042401 5273 Angiosperm View MSA
121344545 5274 Embryophyte View MSA
123380063 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.846       Low
cufflinks 8.482        
cufflinks 7.57        
cufflinks 9.118        
cufflinks 7.182        
cufflinks 8.864        

0 Strain