Gene : SPO11-2 A. thaliana TAIR10
Primary Identifier:  ? AT1G63990 Defline:  (1 of 1) PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2
Genomic Order:  5314 Name:  ? AT1G63990
Secondary Identifier:  ? PAC:19656627
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G63990 0.5kb upstream 0.5kb upstream 3033 true Chr1: 23742842-23745874 Arabidopsis thaliana
AT1G63990 0.5kb upstream 0.5kb upstream 500 false Chr1: 23745375-23745874 Arabidopsis thaliana
AT1G63990 0.5kb downstream 0.5kb downstream 3033 true Chr1: 23742342-23745374 Arabidopsis thaliana
AT1G63990 0.5kb downstream 0.5kb downstream 500 false Chr1: 23742342-23742841 Arabidopsis thaliana
AT1G63990 1.0kb upstream 1.0kb upstream 3533 true Chr1: 23742842-23746374 Arabidopsis thaliana
AT1G63990 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23745375-23746374 Arabidopsis thaliana
AT1G63990 1.0kb downstream 1.0kb downstream 3533 true Chr1: 23741842-23745374 Arabidopsis thaliana
AT1G63990 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23741842-23742841 Arabidopsis thaliana
AT1G63990 2.0kb upstream 2.0kb upstream 4533 true Chr1: 23742842-23747374 Arabidopsis thaliana
AT1G63990 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23745375-23747374 Arabidopsis thaliana
AT1G63990 2.0kb downstream 2.0kb downstream 4533 true Chr1: 23740842-23745374 Arabidopsis thaliana
AT1G63990 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23740842-23742841 Arabidopsis thaliana
AT1G63990 5.0kb upstream 5.0kb upstream 7533 true Chr1: 23742842-23750374 Arabidopsis thaliana
AT1G63990 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23745375-23750374 Arabidopsis thaliana
AT1G63990 5.0kb downstream 5.0kb downstream 7533 true Chr1: 23737842-23745374 Arabidopsis thaliana
AT1G63990 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23737842-23742841 Arabidopsis thaliana
AT1G63990 10.0kb upstream 10.0kb upstream 12533 true Chr1: 23742842-23755374 Arabidopsis thaliana
AT1G63990 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23745375-23755374 Arabidopsis thaliana
AT1G63990 10.0kb downstream 10.0kb downstream 12533 true Chr1: 23732842-23745374 Arabidopsis thaliana
AT1G63990 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23732842-23742841 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368368 5261 Brassicaceae View MSA
123831534 5264 Brassicales-Malvales View MSA
124344109 5266 SBM View MSA
124237579 5268 Malvidae View MSA
124065499 5270 Rosid View MSA
123749374 5271 Pentapetalae View MSA
122793256 5272 Eudicot View MSA
122044830 5273 Angiosperm View MSA
121350394 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.113     Low  
cufflinks 0.496        
cufflinks 0.108     Low  
cufflinks 0.468        
cufflinks 0.096     Low Low
cufflinks 0.532        

0 Strain