Gene : CCOAMT A. thaliana TAIR10
Primary Identifier:  ? AT1G67980 Defline:  (1 of 4) K00588 - caffeoyl-CoA O-methyltransferase (E2.1.1.104)
Genomic Order:  5744 Name:  ? AT1G67980
Secondary Identifier:  ? PAC:19656848
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1121 Arabidopsis thaliana pathologic  
Athaliana PWY-361 Arabidopsis thaliana pathologic  
Athaliana PWY-6039 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G67980 0.5kb upstream 0.5kb upstream 2018 true Chr1: 25487214-25489231 Arabidopsis thaliana
AT1G67980 0.5kb upstream 0.5kb upstream 500 false Chr1: 25487214-25487713 Arabidopsis thaliana
AT1G67980 0.5kb downstream 0.5kb downstream 2018 true Chr1: 25487714-25489731 Arabidopsis thaliana
AT1G67980 0.5kb downstream 0.5kb downstream 500 false Chr1: 25489232-25489731 Arabidopsis thaliana
AT1G67980 1.0kb upstream 1.0kb upstream 2518 true Chr1: 25486714-25489231 Arabidopsis thaliana
AT1G67980 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25486714-25487713 Arabidopsis thaliana
AT1G67980 1.0kb downstream 1.0kb downstream 2518 true Chr1: 25487714-25490231 Arabidopsis thaliana
AT1G67980 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25489232-25490231 Arabidopsis thaliana
AT1G67980 2.0kb upstream 2.0kb upstream 3518 true Chr1: 25485714-25489231 Arabidopsis thaliana
AT1G67980 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25485714-25487713 Arabidopsis thaliana
AT1G67980 2.0kb downstream 2.0kb downstream 3518 true Chr1: 25487714-25491231 Arabidopsis thaliana
AT1G67980 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25489232-25491231 Arabidopsis thaliana
AT1G67980 5.0kb upstream 5.0kb upstream 6518 true Chr1: 25482714-25489231 Arabidopsis thaliana
AT1G67980 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25482714-25487713 Arabidopsis thaliana
AT1G67980 5.0kb downstream 5.0kb downstream 6518 true Chr1: 25487714-25494231 Arabidopsis thaliana
AT1G67980 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25489232-25494231 Arabidopsis thaliana
AT1G67980 10.0kb upstream 10.0kb upstream 11518 true Chr1: 25477714-25489231 Arabidopsis thaliana
AT1G67980 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25477714-25487713 Arabidopsis thaliana
AT1G67980 10.0kb downstream 10.0kb downstream 11518 true Chr1: 25487714-25499231 Arabidopsis thaliana
AT1G67980 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25489232-25499231 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779201 5273 Angiosperm View MSA
122373843 5261 Brassicaceae View MSA
123838295 5264 Brassicales-Malvales View MSA
124322431 5266 SBM View MSA
124247989 5268 Malvidae View MSA
124066642 5270 Rosid View MSA
123738230 5271 Pentapetalae View MSA
122769915 5272 Eudicot View MSA
121050882 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.275       High
cufflinks 0.932       Low
cufflinks 3.516        
cufflinks 2.023        
cufflinks 5.873        
cufflinks 1.821        

0 Strain