Gene : STM A. thaliana TAIR10
Primary Identifier:  ? AT1G62360 Defline:  (1 of 1) PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS
Genomic Order:  5145 Name:  ? AT1G62360
Secondary Identifier:  ? PAC:19654348
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Expression

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62360 0.5kb upstream 0.5kb upstream 3641 true Chr1: 23058582-23062222 Arabidopsis thaliana
AT1G62360 0.5kb upstream 0.5kb upstream 500 false Chr1: 23061723-23062222 Arabidopsis thaliana
AT1G62360 0.5kb downstream 0.5kb downstream 3641 true Chr1: 23058082-23061722 Arabidopsis thaliana
AT1G62360 0.5kb downstream 0.5kb downstream 500 false Chr1: 23058082-23058581 Arabidopsis thaliana
AT1G62360 1.0kb upstream 1.0kb upstream 4141 true Chr1: 23058582-23062722 Arabidopsis thaliana
AT1G62360 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23061723-23062722 Arabidopsis thaliana
AT1G62360 1.0kb downstream 1.0kb downstream 4141 true Chr1: 23057582-23061722 Arabidopsis thaliana
AT1G62360 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23057582-23058581 Arabidopsis thaliana
AT1G62360 2.0kb upstream 2.0kb upstream 5141 true Chr1: 23058582-23063722 Arabidopsis thaliana
AT1G62360 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23061723-23063722 Arabidopsis thaliana
AT1G62360 2.0kb downstream 2.0kb downstream 5141 true Chr1: 23056582-23061722 Arabidopsis thaliana
AT1G62360 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23056582-23058581 Arabidopsis thaliana
AT1G62360 5.0kb upstream 5.0kb upstream 8141 true Chr1: 23058582-23066722 Arabidopsis thaliana
AT1G62360 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23061723-23066722 Arabidopsis thaliana
AT1G62360 5.0kb downstream 5.0kb downstream 8141 true Chr1: 23053582-23061722 Arabidopsis thaliana
AT1G62360 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23053582-23058581 Arabidopsis thaliana
AT1G62360 10.0kb upstream 10.0kb upstream 13141 true Chr1: 23058582-23071722 Arabidopsis thaliana
AT1G62360 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23061723-23071722 Arabidopsis thaliana
AT1G62360 10.0kb downstream 10.0kb downstream 13141 true Chr1: 23048582-23061722 Arabidopsis thaliana
AT1G62360 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23048582-23058581 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365536 5261 Brassicaceae View MSA
123831310 5264 Brassicales-Malvales View MSA
124339086 5266 SBM View MSA
124253570 5268 Malvidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.491        
cufflinks 4.193        
cufflinks 0.176     Low Low
cufflinks 4.716        
cufflinks 0.43        
cufflinks 5.324        

0 Strain