Gene : AT1G61980 A. thaliana TAIR10
Defline:  (1 of 13) PTHR13068:SF31 - F19K23.4 PROTEIN-RELATED Genomic Order:  5103
Name:  ? AT1G61980 Secondary Identifier:  ? PAC:19649382
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G61980 0.5kb upstream 0.5kb upstream 2044 true Chr1: 22907545-22909588 Arabidopsis thaliana
AT1G61980 0.5kb upstream 0.5kb upstream 500 false Chr1: 22907545-22908044 Arabidopsis thaliana
AT1G61980 0.5kb downstream 0.5kb downstream 2044 true Chr1: 22908045-22910088 Arabidopsis thaliana
AT1G61980 0.5kb downstream 0.5kb downstream 500 false Chr1: 22909589-22910088 Arabidopsis thaliana
AT1G61980 1.0kb upstream 1.0kb upstream 2544 true Chr1: 22907045-22909588 Arabidopsis thaliana
AT1G61980 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22907045-22908044 Arabidopsis thaliana
AT1G61980 1.0kb downstream 1.0kb downstream 2544 true Chr1: 22908045-22910588 Arabidopsis thaliana
AT1G61980 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22909589-22910588 Arabidopsis thaliana
AT1G61980 2.0kb upstream 2.0kb upstream 3544 true Chr1: 22906045-22909588 Arabidopsis thaliana
AT1G61980 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22906045-22908044 Arabidopsis thaliana
AT1G61980 2.0kb downstream 2.0kb downstream 3544 true Chr1: 22908045-22911588 Arabidopsis thaliana
AT1G61980 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22909589-22911588 Arabidopsis thaliana
AT1G61980 5.0kb upstream 5.0kb upstream 6544 true Chr1: 22903045-22909588 Arabidopsis thaliana
AT1G61980 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22903045-22908044 Arabidopsis thaliana
AT1G61980 5.0kb downstream 5.0kb downstream 6544 true Chr1: 22908045-22914588 Arabidopsis thaliana
AT1G61980 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22909589-22914588 Arabidopsis thaliana
AT1G61980 10.0kb upstream 10.0kb upstream 11544 true Chr1: 22898045-22909588 Arabidopsis thaliana
AT1G61980 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22898045-22908044 Arabidopsis thaliana
AT1G61980 10.0kb downstream 10.0kb downstream 11544 true Chr1: 22908045-22919588 Arabidopsis thaliana
AT1G61980 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22909589-22919588 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512159 5273 Angiosperm View MSA
122380688 5261 Brassicaceae View MSA
123802849 5264 Brassicales-Malvales View MSA
124300011 5266 SBM View MSA
124151292 5268 Malvidae View MSA
123876757 5270 Rosid View MSA
123460384 5271 Pentapetalae View MSA
122495758 5272 Eudicot View MSA
120785185 5274 Embryophyte View MSA
122827058 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.852       High
cufflinks 6.257        
cufflinks 6.688        
cufflinks 6.257        
cufflinks 6.403        
cufflinks 5.934       Low

0 Strain