Gene : AT1G61960 A. thaliana TAIR10
Defline:  (1 of 13) PTHR13068:SF31 - F19K23.4 PROTEIN-RELATED Genomic Order:  5101
Name:  ? AT1G61960 Secondary Identifier:  ? PAC:19650179
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G61960 0.5kb upstream 0.5kb upstream 2188 true Chr1: 22901650-22903837 Arabidopsis thaliana
AT1G61960 0.5kb upstream 0.5kb upstream 500 false Chr1: 22901650-22902149 Arabidopsis thaliana
AT1G61960 0.5kb downstream 0.5kb downstream 2188 true Chr1: 22902150-22904337 Arabidopsis thaliana
AT1G61960 0.5kb downstream 0.5kb downstream 500 false Chr1: 22903838-22904337 Arabidopsis thaliana
AT1G61960 1.0kb upstream 1.0kb upstream 2688 true Chr1: 22901150-22903837 Arabidopsis thaliana
AT1G61960 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22901150-22902149 Arabidopsis thaliana
AT1G61960 1.0kb downstream 1.0kb downstream 2688 true Chr1: 22902150-22904837 Arabidopsis thaliana
AT1G61960 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22903838-22904837 Arabidopsis thaliana
AT1G61960 2.0kb upstream 2.0kb upstream 3688 true Chr1: 22900150-22903837 Arabidopsis thaliana
AT1G61960 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22900150-22902149 Arabidopsis thaliana
AT1G61960 2.0kb downstream 2.0kb downstream 3688 true Chr1: 22902150-22905837 Arabidopsis thaliana
AT1G61960 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22903838-22905837 Arabidopsis thaliana
AT1G61960 5.0kb upstream 5.0kb upstream 6688 true Chr1: 22897150-22903837 Arabidopsis thaliana
AT1G61960 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22897150-22902149 Arabidopsis thaliana
AT1G61960 5.0kb downstream 5.0kb downstream 6688 true Chr1: 22902150-22908837 Arabidopsis thaliana
AT1G61960 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22903838-22908837 Arabidopsis thaliana
AT1G61960 10.0kb upstream 10.0kb upstream 11688 true Chr1: 22892150-22903837 Arabidopsis thaliana
AT1G61960 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22892150-22902149 Arabidopsis thaliana
AT1G61960 10.0kb downstream 10.0kb downstream 11688 true Chr1: 22902150-22913837 Arabidopsis thaliana
AT1G61960 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22903838-22913837 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381426 5261 Brassicaceae View MSA
123803239 5264 Brassicales-Malvales View MSA
124300363 5266 SBM View MSA
124151561 5268 Malvidae View MSA
123876966 5270 Rosid View MSA
123752887 5271 Pentapetalae View MSA
122796698 5272 Eudicot View MSA
122050390 5273 Angiosperm View MSA
121351168 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.967        
cufflinks 3.912       High
cufflinks 2.95        
cufflinks 3.334        
cufflinks 3.0        
cufflinks 3.705        

0 Strain