Gene : AT1G62510 A. thaliana TAIR10
Defline:  (1 of 22) PF00234 - Protease inhibitor/seed storage/LTP family (Tryp_alpha_amyl) Genomic Order:  5160
Name:  ? AT1G62510 Secondary Identifier:  ? PAC:19649338
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62510 0.5kb upstream 0.5kb upstream 1323 true Chr1: 23136369-23137691 Arabidopsis thaliana
AT1G62510 0.5kb upstream 0.5kb upstream 500 false Chr1: 23137192-23137691 Arabidopsis thaliana
AT1G62510 0.5kb downstream 0.5kb downstream 1323 true Chr1: 23135869-23137191 Arabidopsis thaliana
AT1G62510 0.5kb downstream 0.5kb downstream 500 false Chr1: 23135869-23136368 Arabidopsis thaliana
AT1G62510 1.0kb upstream 1.0kb upstream 1823 true Chr1: 23136369-23138191 Arabidopsis thaliana
AT1G62510 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23137192-23138191 Arabidopsis thaliana
AT1G62510 1.0kb downstream 1.0kb downstream 1823 true Chr1: 23135369-23137191 Arabidopsis thaliana
AT1G62510 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23135369-23136368 Arabidopsis thaliana
AT1G62510 2.0kb upstream 2.0kb upstream 2823 true Chr1: 23136369-23139191 Arabidopsis thaliana
AT1G62510 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23137192-23139191 Arabidopsis thaliana
AT1G62510 2.0kb downstream 2.0kb downstream 2823 true Chr1: 23134369-23137191 Arabidopsis thaliana
AT1G62510 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23134369-23136368 Arabidopsis thaliana
AT1G62510 5.0kb upstream 5.0kb upstream 5823 true Chr1: 23136369-23142191 Arabidopsis thaliana
AT1G62510 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23137192-23142191 Arabidopsis thaliana
AT1G62510 5.0kb downstream 5.0kb downstream 5823 true Chr1: 23131369-23137191 Arabidopsis thaliana
AT1G62510 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23131369-23136368 Arabidopsis thaliana
AT1G62510 10.0kb upstream 10.0kb upstream 10823 true Chr1: 23136369-23147191 Arabidopsis thaliana
AT1G62510 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23137192-23147191 Arabidopsis thaliana
AT1G62510 10.0kb downstream 10.0kb downstream 10823 true Chr1: 23126369-23137191 Arabidopsis thaliana
AT1G62510 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23126369-23136368 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380123 5261 Brassicaceae View MSA
123836715 5264 Brassicales-Malvales View MSA
124342159 5266 SBM View MSA
124253928 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.803        
cufflinks 0.349        
cufflinks 45.858     High High
cufflinks 0.43        
cufflinks 42.178     High High
cufflinks 0.057     Low Low

0 Strain