Gene : IRT3 A. thaliana TAIR10
Primary Identifier:  ? AT1G60960 Defline:  (1 of 2) PTHR11040//PTHR11040:SF52 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED
Genomic Order:  4986 Name:  ? AT1G60960
Secondary Identifier:  ? PAC:19657350
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60960 0.5kb upstream 0.5kb upstream 2405 true Chr1: 22445310-22447714 Arabidopsis thaliana
AT1G60960 0.5kb upstream 0.5kb upstream 500 false Chr1: 22447215-22447714 Arabidopsis thaliana
AT1G60960 0.5kb downstream 0.5kb downstream 2405 true Chr1: 22444810-22447214 Arabidopsis thaliana
AT1G60960 0.5kb downstream 0.5kb downstream 500 false Chr1: 22444810-22445309 Arabidopsis thaliana
AT1G60960 1.0kb upstream 1.0kb upstream 2905 true Chr1: 22445310-22448214 Arabidopsis thaliana
AT1G60960 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22447215-22448214 Arabidopsis thaliana
AT1G60960 1.0kb downstream 1.0kb downstream 2905 true Chr1: 22444310-22447214 Arabidopsis thaliana
AT1G60960 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22444310-22445309 Arabidopsis thaliana
AT1G60960 2.0kb upstream 2.0kb upstream 3905 true Chr1: 22445310-22449214 Arabidopsis thaliana
AT1G60960 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22447215-22449214 Arabidopsis thaliana
AT1G60960 2.0kb downstream 2.0kb downstream 3905 true Chr1: 22443310-22447214 Arabidopsis thaliana
AT1G60960 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22443310-22445309 Arabidopsis thaliana
AT1G60960 5.0kb upstream 5.0kb upstream 6905 true Chr1: 22445310-22452214 Arabidopsis thaliana
AT1G60960 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22447215-22452214 Arabidopsis thaliana
AT1G60960 5.0kb downstream 5.0kb downstream 6905 true Chr1: 22440310-22447214 Arabidopsis thaliana
AT1G60960 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22440310-22445309 Arabidopsis thaliana
AT1G60960 10.0kb upstream 10.0kb upstream 11905 true Chr1: 22445310-22457214 Arabidopsis thaliana
AT1G60960 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22447215-22457214 Arabidopsis thaliana
AT1G60960 10.0kb downstream 10.0kb downstream 11905 true Chr1: 22435310-22447214 Arabidopsis thaliana
AT1G60960 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22435310-22445309 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369515 5261 Brassicaceae View MSA
123835130 5264 Brassicales-Malvales View MSA
124342533 5266 SBM View MSA
124239193 5268 Malvidae View MSA
124066491 5270 Rosid View MSA
123743015 5271 Pentapetalae View MSA
122796517 5272 Eudicot View MSA
122042436 5273 Angiosperm View MSA
121350029 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.922        
cufflinks 10.38        
cufflinks 4.623       Low
cufflinks 12.282        
cufflinks 11.498        
cufflinks 9.013        

0 Strain