Gene : ATRPAC42 A. thaliana TAIR10
Primary Identifier:  ? AT1G60850 Defline:  (1 of 2) K03027 - DNA-directed RNA polymerases I and III subunit RPAC1 (RPC40, POLR1C)
Genomic Order:  4975 Name:  ? AT1G60850
Secondary Identifier:  ? PAC:19649931
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60850 0.5kb upstream 0.5kb upstream 2947 true Chr1: 22397916-22400862 Arabidopsis thaliana
AT1G60850 0.5kb upstream 0.5kb upstream 500 false Chr1: 22400363-22400862 Arabidopsis thaliana
AT1G60850 0.5kb downstream 0.5kb downstream 2947 true Chr1: 22397416-22400362 Arabidopsis thaliana
AT1G60850 0.5kb downstream 0.5kb downstream 500 false Chr1: 22397416-22397915 Arabidopsis thaliana
AT1G60850 1.0kb upstream 1.0kb upstream 3447 true Chr1: 22397916-22401362 Arabidopsis thaliana
AT1G60850 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22400363-22401362 Arabidopsis thaliana
AT1G60850 1.0kb downstream 1.0kb downstream 3447 true Chr1: 22396916-22400362 Arabidopsis thaliana
AT1G60850 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22396916-22397915 Arabidopsis thaliana
AT1G60850 2.0kb upstream 2.0kb upstream 4447 true Chr1: 22397916-22402362 Arabidopsis thaliana
AT1G60850 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22400363-22402362 Arabidopsis thaliana
AT1G60850 2.0kb downstream 2.0kb downstream 4447 true Chr1: 22395916-22400362 Arabidopsis thaliana
AT1G60850 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22395916-22397915 Arabidopsis thaliana
AT1G60850 5.0kb upstream 5.0kb upstream 7447 true Chr1: 22397916-22405362 Arabidopsis thaliana
AT1G60850 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22400363-22405362 Arabidopsis thaliana
AT1G60850 5.0kb downstream 5.0kb downstream 7447 true Chr1: 22392916-22400362 Arabidopsis thaliana
AT1G60850 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22392916-22397915 Arabidopsis thaliana
AT1G60850 10.0kb upstream 10.0kb upstream 12447 true Chr1: 22397916-22410362 Arabidopsis thaliana
AT1G60850 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22400363-22410362 Arabidopsis thaliana
AT1G60850 10.0kb downstream 10.0kb downstream 12447 true Chr1: 22387916-22400362 Arabidopsis thaliana
AT1G60850 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22387916-22397915 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372384 5261 Brassicaceae View MSA
123840718 5264 Brassicales-Malvales View MSA
124340568 5266 SBM View MSA
124252519 5268 Malvidae View MSA
124063723 5270 Rosid View MSA
123738682 5271 Pentapetalae View MSA
122789471 5272 Eudicot View MSA
122043698 5273 Angiosperm View MSA
121344052 5274 Embryophyte View MSA
123424148 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.607        
cufflinks 2.652        
cufflinks 1.266        
cufflinks 2.747        
cufflinks 1.136       Low
cufflinks 3.002       High

0 Strain