Gene : ABC4 A. thaliana TAIR10
Primary Identifier:  ? AT1G60600 Defline:  (1 of 1) 2.5.1.74 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase
Genomic Order:  4949 Name:  ? AT1G60600
Secondary Identifier:  ? PAC:19657231
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60600 0.5kb upstream 0.5kb upstream 3215 true Chr1: 22324645-22327859 Arabidopsis thaliana
AT1G60600 0.5kb upstream 0.5kb upstream 500 false Chr1: 22327360-22327859 Arabidopsis thaliana
AT1G60600 0.5kb downstream 0.5kb downstream 3215 true Chr1: 22324145-22327359 Arabidopsis thaliana
AT1G60600 0.5kb downstream 0.5kb downstream 500 false Chr1: 22324145-22324644 Arabidopsis thaliana
AT1G60600 1.0kb upstream 1.0kb upstream 3715 true Chr1: 22324645-22328359 Arabidopsis thaliana
AT1G60600 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22327360-22328359 Arabidopsis thaliana
AT1G60600 1.0kb downstream 1.0kb downstream 3715 true Chr1: 22323645-22327359 Arabidopsis thaliana
AT1G60600 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22323645-22324644 Arabidopsis thaliana
AT1G60600 2.0kb upstream 2.0kb upstream 4715 true Chr1: 22324645-22329359 Arabidopsis thaliana
AT1G60600 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22327360-22329359 Arabidopsis thaliana
AT1G60600 2.0kb downstream 2.0kb downstream 4715 true Chr1: 22322645-22327359 Arabidopsis thaliana
AT1G60600 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22322645-22324644 Arabidopsis thaliana
AT1G60600 5.0kb upstream 5.0kb upstream 7715 true Chr1: 22324645-22332359 Arabidopsis thaliana
AT1G60600 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22327360-22332359 Arabidopsis thaliana
AT1G60600 5.0kb downstream 5.0kb downstream 7715 true Chr1: 22319645-22327359 Arabidopsis thaliana
AT1G60600 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22319645-22324644 Arabidopsis thaliana
AT1G60600 10.0kb upstream 10.0kb upstream 12715 true Chr1: 22324645-22337359 Arabidopsis thaliana
AT1G60600 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22327360-22337359 Arabidopsis thaliana
AT1G60600 10.0kb downstream 10.0kb downstream 12715 true Chr1: 22314645-22327359 Arabidopsis thaliana
AT1G60600 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22314645-22324644 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371954 5261 Brassicaceae View MSA
123833066 5264 Brassicales-Malvales View MSA
124345231 5266 SBM View MSA
124241888 5268 Malvidae View MSA
124069094 5270 Rosid View MSA
123746883 5271 Pentapetalae View MSA
122792815 5272 Eudicot View MSA
122047568 5273 Angiosperm View MSA
121344733 5274 Embryophyte View MSA
123423871 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.415       High
cufflinks 0.26     Low Low
cufflinks 7.005        
cufflinks 0.318     Low  
cufflinks 4.9        
cufflinks 0.347        

0 Strain