Gene : AT1G58110 A. thaliana TAIR10
Defline:  (1 of 3) PTHR13301:SF25 - BZIP TRANSCRIPTION FACTOR-LIKE PROTEIN Genomic Order:  4787
Name:  ? AT1G58110 Secondary Identifier:  ? PAC:19652942
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G58110 0.5kb upstream 0.5kb upstream 3186 true Chr1: 21515474-21518659 Arabidopsis thaliana
AT1G58110 0.5kb upstream 0.5kb upstream 500 false Chr1: 21518160-21518659 Arabidopsis thaliana
AT1G58110 0.5kb downstream 0.5kb downstream 3186 true Chr1: 21514974-21518159 Arabidopsis thaliana
AT1G58110 0.5kb downstream 0.5kb downstream 500 false Chr1: 21514974-21515473 Arabidopsis thaliana
AT1G58110 1.0kb upstream 1.0kb upstream 3686 true Chr1: 21515474-21519159 Arabidopsis thaliana
AT1G58110 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21518160-21519159 Arabidopsis thaliana
AT1G58110 1.0kb downstream 1.0kb downstream 3686 true Chr1: 21514474-21518159 Arabidopsis thaliana
AT1G58110 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21514474-21515473 Arabidopsis thaliana
AT1G58110 2.0kb upstream 2.0kb upstream 4686 true Chr1: 21515474-21520159 Arabidopsis thaliana
AT1G58110 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21518160-21520159 Arabidopsis thaliana
AT1G58110 2.0kb downstream 2.0kb downstream 4686 true Chr1: 21513474-21518159 Arabidopsis thaliana
AT1G58110 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21513474-21515473 Arabidopsis thaliana
AT1G58110 5.0kb upstream 5.0kb upstream 7686 true Chr1: 21515474-21523159 Arabidopsis thaliana
AT1G58110 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21518160-21523159 Arabidopsis thaliana
AT1G58110 5.0kb downstream 5.0kb downstream 7686 true Chr1: 21510474-21518159 Arabidopsis thaliana
AT1G58110 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21510474-21515473 Arabidopsis thaliana
AT1G58110 10.0kb upstream 10.0kb upstream 12686 true Chr1: 21515474-21528159 Arabidopsis thaliana
AT1G58110 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21518160-21528159 Arabidopsis thaliana
AT1G58110 10.0kb downstream 10.0kb downstream 12686 true Chr1: 21505474-21518159 Arabidopsis thaliana
AT1G58110 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21505474-21515473 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363757 5261 Brassicaceae View MSA
123838404 5264 Brassicales-Malvales View MSA
124349972 5266 SBM View MSA
124238236 5268 Malvidae View MSA
124067455 5270 Rosid View MSA
123741785 5271 Pentapetalae View MSA
122796865 5272 Eudicot View MSA
122048673 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.767       High
cufflinks 6.411        
cufflinks 4.852       Low
cufflinks 7.875        
cufflinks 4.441       Low
cufflinks 7.158        

0 Strain