Gene : AT1G56300 A. thaliana TAIR10
Defline:  (1 of 97) PF00226 - DnaJ domain (DnaJ) Genomic Order:  4694
Name:  ? AT1G56300 Secondary Identifier:  ? PAC:19650286
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G56300 0.5kb upstream 0.5kb upstream 2104 true Chr1: 21078820-21080923 Arabidopsis thaliana
AT1G56300 0.5kb upstream 0.5kb upstream 500 false Chr1: 21080424-21080923 Arabidopsis thaliana
AT1G56300 0.5kb downstream 0.5kb downstream 2104 true Chr1: 21078320-21080423 Arabidopsis thaliana
AT1G56300 0.5kb downstream 0.5kb downstream 500 false Chr1: 21078320-21078819 Arabidopsis thaliana
AT1G56300 1.0kb upstream 1.0kb upstream 2604 true Chr1: 21078820-21081423 Arabidopsis thaliana
AT1G56300 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21080424-21081423 Arabidopsis thaliana
AT1G56300 1.0kb downstream 1.0kb downstream 2604 true Chr1: 21077820-21080423 Arabidopsis thaliana
AT1G56300 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21077820-21078819 Arabidopsis thaliana
AT1G56300 2.0kb upstream 2.0kb upstream 3604 true Chr1: 21078820-21082423 Arabidopsis thaliana
AT1G56300 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21080424-21082423 Arabidopsis thaliana
AT1G56300 2.0kb downstream 2.0kb downstream 3604 true Chr1: 21076820-21080423 Arabidopsis thaliana
AT1G56300 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21076820-21078819 Arabidopsis thaliana
AT1G56300 5.0kb upstream 5.0kb upstream 6604 true Chr1: 21078820-21085423 Arabidopsis thaliana
AT1G56300 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21080424-21085423 Arabidopsis thaliana
AT1G56300 5.0kb downstream 5.0kb downstream 6604 true Chr1: 21073820-21080423 Arabidopsis thaliana
AT1G56300 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21073820-21078819 Arabidopsis thaliana
AT1G56300 10.0kb upstream 10.0kb upstream 11604 true Chr1: 21078820-21090423 Arabidopsis thaliana
AT1G56300 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21080424-21090423 Arabidopsis thaliana
AT1G56300 10.0kb downstream 10.0kb downstream 11604 true Chr1: 21068820-21080423 Arabidopsis thaliana
AT1G56300 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21068820-21078819 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376122 5261 Brassicaceae View MSA
123837825 5264 Brassicales-Malvales View MSA
124349771 5266 SBM View MSA
124250078 5268 Malvidae View MSA
124064928 5270 Rosid View MSA
123742769 5271 Pentapetalae View MSA
122796885 5272 Eudicot View MSA
122048239 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121310900 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.423        
cufflinks 20.986        
cufflinks 47.107     High  
cufflinks 21.819        
cufflinks 68.487     High High
cufflinks 16.419       Low

0 Strain