Gene : PBG1 A. thaliana TAIR10
Primary Identifier:  ? AT1G56450 Defline:  (1 of 1) K02736 - 20S proteasome subunit beta 7 (PSMB4)
Genomic Order:  4712 Name:  ? AT1G56450
Secondary Identifier:  ? PAC:19658067
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G56450 0.5kb upstream 0.5kb upstream 3018 true Chr1: 21141383-21144400 Arabidopsis thaliana
AT1G56450 0.5kb upstream 0.5kb upstream 500 false Chr1: 21141383-21141882 Arabidopsis thaliana
AT1G56450 0.5kb downstream 0.5kb downstream 3018 true Chr1: 21141883-21144900 Arabidopsis thaliana
AT1G56450 0.5kb downstream 0.5kb downstream 500 false Chr1: 21144401-21144900 Arabidopsis thaliana
AT1G56450 1.0kb upstream 1.0kb upstream 3518 true Chr1: 21140883-21144400 Arabidopsis thaliana
AT1G56450 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21140883-21141882 Arabidopsis thaliana
AT1G56450 1.0kb downstream 1.0kb downstream 3518 true Chr1: 21141883-21145400 Arabidopsis thaliana
AT1G56450 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21144401-21145400 Arabidopsis thaliana
AT1G56450 2.0kb upstream 2.0kb upstream 4518 true Chr1: 21139883-21144400 Arabidopsis thaliana
AT1G56450 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21139883-21141882 Arabidopsis thaliana
AT1G56450 2.0kb downstream 2.0kb downstream 4518 true Chr1: 21141883-21146400 Arabidopsis thaliana
AT1G56450 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21144401-21146400 Arabidopsis thaliana
AT1G56450 5.0kb upstream 5.0kb upstream 7518 true Chr1: 21136883-21144400 Arabidopsis thaliana
AT1G56450 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21136883-21141882 Arabidopsis thaliana
AT1G56450 5.0kb downstream 5.0kb downstream 7518 true Chr1: 21141883-21149400 Arabidopsis thaliana
AT1G56450 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21144401-21149400 Arabidopsis thaliana
AT1G56450 10.0kb upstream 10.0kb upstream 12518 true Chr1: 21131883-21144400 Arabidopsis thaliana
AT1G56450 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21131883-21141882 Arabidopsis thaliana
AT1G56450 10.0kb downstream 10.0kb downstream 12518 true Chr1: 21141883-21154400 Arabidopsis thaliana
AT1G56450 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21144401-21154400 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377102 5261 Brassicaceae View MSA
123838230 5264 Brassicales-Malvales View MSA
124339371 5266 SBM View MSA
124240458 5268 Malvidae View MSA
124062150 5270 Rosid View MSA
123753657 5271 Pentapetalae View MSA
122793050 5272 Eudicot View MSA
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.177     High  
cufflinks 31.694     High  
cufflinks 26.659     High Low
cufflinks 31.877     High  
cufflinks 28.854     High  
cufflinks 38.454     High High

0 Strain