Gene : GolS2 A. thaliana TAIR10
Primary Identifier:  ? AT1G56600 Defline:  (1 of 3) PTHR11183//PTHR11183:SF59 - GLYCOGENIN // GALACTINOL SYNTHASE 2-RELATED
Genomic Order:  4726 Name:  ? AT1G56600
Secondary Identifier:  ? PAC:19654456
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5337 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G56600 0.5kb upstream 0.5kb upstream 2560 true Chr1: 21207037-21209596 Arabidopsis thaliana
AT1G56600 0.5kb upstream 0.5kb upstream 500 false Chr1: 21207037-21207536 Arabidopsis thaliana
AT1G56600 0.5kb downstream 0.5kb downstream 2560 true Chr1: 21207537-21210096 Arabidopsis thaliana
AT1G56600 0.5kb downstream 0.5kb downstream 500 false Chr1: 21209597-21210096 Arabidopsis thaliana
AT1G56600 1.0kb upstream 1.0kb upstream 3060 true Chr1: 21206537-21209596 Arabidopsis thaliana
AT1G56600 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21206537-21207536 Arabidopsis thaliana
AT1G56600 1.0kb downstream 1.0kb downstream 3060 true Chr1: 21207537-21210596 Arabidopsis thaliana
AT1G56600 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21209597-21210596 Arabidopsis thaliana
AT1G56600 2.0kb upstream 2.0kb upstream 4060 true Chr1: 21205537-21209596 Arabidopsis thaliana
AT1G56600 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21205537-21207536 Arabidopsis thaliana
AT1G56600 2.0kb downstream 2.0kb downstream 4060 true Chr1: 21207537-21211596 Arabidopsis thaliana
AT1G56600 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21209597-21211596 Arabidopsis thaliana
AT1G56600 5.0kb upstream 5.0kb upstream 7060 true Chr1: 21202537-21209596 Arabidopsis thaliana
AT1G56600 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21202537-21207536 Arabidopsis thaliana
AT1G56600 5.0kb downstream 5.0kb downstream 7060 true Chr1: 21207537-21214596 Arabidopsis thaliana
AT1G56600 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21209597-21214596 Arabidopsis thaliana
AT1G56600 10.0kb upstream 10.0kb upstream 12060 true Chr1: 21197537-21209596 Arabidopsis thaliana
AT1G56600 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21197537-21207536 Arabidopsis thaliana
AT1G56600 10.0kb downstream 10.0kb downstream 12060 true Chr1: 21207537-21219596 Arabidopsis thaliana
AT1G56600 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21209597-21219596 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368659 5261 Brassicaceae View MSA
123841636 5264 Brassicales-Malvales View MSA
124338100 5266 SBM View MSA
124253823 5268 Malvidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.669       High
cufflinks 1.302       Low
cufflinks 4.204        
cufflinks 6.401        
cufflinks 6.884        
cufflinks 2.19        

0 Strain