Gene : AT1G56050 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23305:SF12 - GTP-BINDING PROTEIN-RELATED Genomic Order:  4666
Name:  ? AT1G56050 Secondary Identifier:  ? PAC:19652616
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G56050 0.5kb upstream 0.5kb upstream 3123 true Chr1: 20963219-20966341 Arabidopsis thaliana
AT1G56050 0.5kb upstream 0.5kb upstream 500 false Chr1: 20963219-20963718 Arabidopsis thaliana
AT1G56050 0.5kb downstream 0.5kb downstream 3123 true Chr1: 20963719-20966841 Arabidopsis thaliana
AT1G56050 0.5kb downstream 0.5kb downstream 500 false Chr1: 20966342-20966841 Arabidopsis thaliana
AT1G56050 1.0kb upstream 1.0kb upstream 3623 true Chr1: 20962719-20966341 Arabidopsis thaliana
AT1G56050 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20962719-20963718 Arabidopsis thaliana
AT1G56050 1.0kb downstream 1.0kb downstream 3623 true Chr1: 20963719-20967341 Arabidopsis thaliana
AT1G56050 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20966342-20967341 Arabidopsis thaliana
AT1G56050 2.0kb upstream 2.0kb upstream 4623 true Chr1: 20961719-20966341 Arabidopsis thaliana
AT1G56050 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20961719-20963718 Arabidopsis thaliana
AT1G56050 2.0kb downstream 2.0kb downstream 4623 true Chr1: 20963719-20968341 Arabidopsis thaliana
AT1G56050 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20966342-20968341 Arabidopsis thaliana
AT1G56050 5.0kb upstream 5.0kb upstream 7623 true Chr1: 20958719-20966341 Arabidopsis thaliana
AT1G56050 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20958719-20963718 Arabidopsis thaliana
AT1G56050 5.0kb downstream 5.0kb downstream 7623 true Chr1: 20963719-20971341 Arabidopsis thaliana
AT1G56050 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20966342-20971341 Arabidopsis thaliana
AT1G56050 10.0kb upstream 10.0kb upstream 12623 true Chr1: 20953719-20966341 Arabidopsis thaliana
AT1G56050 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20953719-20963718 Arabidopsis thaliana
AT1G56050 10.0kb downstream 10.0kb downstream 12623 true Chr1: 20963719-20976341 Arabidopsis thaliana
AT1G56050 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20966342-20976341 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369060 5261 Brassicaceae View MSA
123830585 5264 Brassicales-Malvales View MSA
124336754 5266 SBM View MSA
124243768 5268 Malvidae View MSA
124061992 5270 Rosid View MSA
123739413 5271 Pentapetalae View MSA
122786504 5272 Eudicot View MSA
122050132 5273 Angiosperm View MSA
121346594 5274 Embryophyte View MSA
123424688 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.617       High
cufflinks 3.649        
cufflinks 18.192       High
cufflinks 3.523        
cufflinks 12.536        
cufflinks 4.097        

0 Strain